Gene
RNA
| Item | Value |
|---|---|
| gene id | G1713421 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 18824464 ~ 18825189 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1963042 | False | 354 | lncRNA | 0.39 | 3 | 18824464 | 18825189 |
| TU1963043 | True | 275 | lncRNA | 0.39 | 2 | 18824464 | 18825189 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499903 | LOC106609567 | coding | upstream | 53932 | 18758459 ~ 18770532 (+) |
| LOC110499901 | LOC106609586 | coding | upstream | 69819 | 18740386 ~ 18754645 (+) |
| LOC110499900 | LOC106596632 | coding | upstream | 90412 | 18726697 ~ 18734052 (+) |
| fut9 | fut9 | coding | upstream | 103872 | 18719308 ~ 18720592 (+) |
| si:ch211-244b2.3 | LOC106609042 | coding | upstream | 141158 | 18671875 ~ 18683306 (+) |
| LOC110501017 | LOC106609562 | coding | downstream | 398248 | 19223437 ~ 19226634 (+) |
| LOC118942896 | NA | coding | downstream | 435556 | 19260745 ~ 19279035 (+) |
| bik | LOC106609559 | coding | downstream | 477179 | 19302368 ~ 19306083 (+) |
| LOC110499913 | NA | coding | downstream | 506775 | 19331964 ~ 19337651 (+) |
| LOC118942905 | NA | coding | downstream | 559803 | 19384992 ~ 19388072 (+) |
| G1713386 | NA | non-coding | upstream | 84339 | 18739506 ~ 18740125 (+) |
| G1713385 | NA | non-coding | upstream | 85518 | 18737630 ~ 18738946 (+) |
| G1713384 | NA | non-coding | upstream | 88340 | 18734791 ~ 18737436 (+) |
| G1713379 | NA | non-coding | upstream | 100006 | 18724053 ~ 18724458 (+) |
| G1713372 | NA | non-coding | upstream | 115363 | 18708772 ~ 18709101 (+) |
| G1713808 | NA | non-coding | downstream | 30732 | 18855921 ~ 18856161 (+) |
| G1713814 | NA | non-coding | downstream | 34461 | 18859650 ~ 18859869 (+) |
| G1713818 | NA | non-coding | downstream | 37825 | 18863014 ~ 18863254 (+) |
| G1713820 | NA | non-coding | downstream | 38517 | 18863706 ~ 18866161 (+) |
| G1713824 | NA | non-coding | downstream | 42251 | 18867440 ~ 18869695 (+) |
| G1713262 | NA | other | upstream | 323590 | 18497147 ~ 18500874 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | upstream | 556956 | 18247128 ~ 18268691 (+) |
| G1712658 | NA | other | upstream | 1155878 | 17666280 ~ 17668586 (+) |
| LOC110501009 | LOC105020375 | other | upstream | 1880675 | 16914013 ~ 16973778 (+) |
| G1714090 | NA | other | downstream | 559783 | 19384972 ~ 19754609 (+) |
| nmes1 | nmes1 | other | downstream | 1284009 | 20109125 ~ 20113891 (+) |
| G1715392 | NA | other | downstream | 1733233 | 20558422 ~ 20558751 (+) |
| LOC110499980 | LOC106576426 | other | downstream | 2173409 | 20954576 ~ 21004439 (+) |
| G1717161 | LOC106576319 | other | downstream | 3350774 | 22175963 ~ 22180897 (+) |
