G1714253


Basic Information

Item Value
gene id G1714253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18914003 ~ 18915793 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964088
agggtgggtatgctagttttggtattgtctagggtttttgtatgtctaggggttttgttggtctaggtatttgtatgtctatggtggcctgatatgtttcccaatcagaggcagctgtttatcgtttatcagtctctgattggggatcatatttaggtagccattttcccttttgtgttcGTAGGTTCTTGTctgtgtgtagttgcctgtcagcactcatttgtatagcttcacgtgtcgttttgttattttggttagtttgttcagtgttcattctgaATACAGTTTATTAAAGAATTATCCcacaccacgctgcgccttggtccgattcatacgacgaacgtgacggtaggggagagagagagcggtacgaatgagagggagatgaagggagaaagaaaagtggcagagagaagagagaaagggttgGGGTTGAGAAAGGATggaattggagagagagaaacagaacgaacgaaatagggagagaTtgggtgagagaaggagggaattagagagagagaaacagaacaaacgaaatagggagagagtggggtgagagaaggagggaattagagagagagaaacagaacaaaCGAAATAGGGAGAGTGGATTGAGAGgagggaattagagagagagaaacagaacaaacgaaatagggagagagtggggtgagagaaggagggaggttgCAGCAAGACAGCAGACATGTTTTTCACAACAGCTGTTGAGGAAACAGAGTGAAGGGTTAGAGGCAAATCCTACCACCTGCCCTTGTTTTACAATGACGCCAGGTGACCGATCATACCCAGCCATCATGCTGCTCACCCTGCCCCACCTGACCACCTGGCCAATCAAATCATCACCTCACATAGGGGTTGTGACACATACAATATTCCGCTTAATTGACGACCATAAATCATTTTACACTTCAGTCAACCTTAATGGACTTACCTACATTAGTCCTACTTATTCATTACTTCTCAAACCACAGCCTCCTACCTATATAGGGCTCtactttgacaccctattccctatatagggccctgctttgacaccctattccctatatagtgcactactttgacaccctattccctatttagtgcactattttgacaccctattccctaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964088 True 1133 lncRNA 0.44 2 18914003 18915793

Neighbor

gene id symbol gene type direction distance location
LOC110500916 LOC106609043 coding downstream 206346 18701914 ~ 18707657 (-)
LOC110499898 scyl2 coding downstream 212228 18683391 ~ 18701775 (-)
LOC110499895 LOC106609039 coding downstream 256311 18654035 ~ 18657692 (-)
LOC110499883 LOC106576497 coding downstream 681814 18203539 ~ 18232189 (-)
LOC110499880 LOC106576467 coding downstream 779652 18130099 ~ 18134351 (-)
LOC110501016 LOC106609564 coding upstream 258300 19174093 ~ 19221344 (-)
LOC110499908 LOC106609563 coding upstream 312205 19227998 ~ 19234102 (-)
LOC110499909 LOC106609560 coding upstream 322325 19238118 ~ 19256001 (-)
LOC110501018 LOC106576372 coding upstream 340367 19256160 ~ 19294094 (-)
LOC110501019 LOC106576374 coding upstream 378478 19294271 ~ 19302251 (-)
G1714237 NA non-coding downstream 31208 18882151 ~ 18882795 (-)
G1714233 NA non-coding downstream 46995 18866741 ~ 18867008 (-)
G1713819 NA non-coding downstream 50830 18862852 ~ 18863173 (-)
G1713815 NA non-coding downstream 54609 18859098 ~ 18859394 (-)
G1713806 NA non-coding downstream 63018 18846269 ~ 18850985 (-)
LOC110501015 LOC106609565 non-coding upstream 46334 18863543 ~ 19171552 (-)
G1714328 NA non-coding upstream 113524 19029317 ~ 19029575 (-)
G1714330 NA non-coding upstream 116524 19032317 ~ 19032521 (-)
G1714333 NA non-coding upstream 122073 19037866 ~ 19038156 (-)
G1714349 NA non-coding upstream 155345 19071138 ~ 19130658 (-)
G1713755 NA other downstream 148199 18765460 ~ 18766379 (-)
G1713719 NA other downstream 244678 18668834 ~ 18669325 (-)
G1713637 NA other downstream 308486 18519287 ~ 18605517 (-)
G1713604 NA other downstream 443186 18470513 ~ 18470817 (-)
G1712424 NA other downstream 1618268 17295519 ~ 17295735 (-)
G1714475 NA other upstream 535407 19400335 ~ 19453678 (-)
G1714470 NA other upstream 688378 19599461 ~ 19617954 (-)
G1714755 NA other upstream 986992 19902785 ~ 19903457 (-)
G1715085 LOC106609522 other upstream 1078878 19994671 ~ 19995602 (-)
G1715091 LOC106576402 other upstream 1095517 20011310 ~ 20025695 (-)

Expression


Co-expression Network