G1713990


Basic Information

Item Value
gene id G1713990
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19160285 ~ 19160808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1963698
atagacagggtgtaccggtacagagtcaatgtggaggctatagacagggtgtactggtacagagtcaatgtggaggctatagacagggtgtaccagtacagagtcaatgtggaggctatagacagggtgtaccggtacagagtcaatgtggaggctatagacagggtgtaccggtacagagtcaatgtggaggctatagacagggtgtactggtacagagtcaatgtggaggctatagacagggtgtactgtctatagacagggtgtaccggtacagagtcaatgtggaggctatagacagggtgtaccagtacagagtcaatgtggaggctatagacagggtgtaccggtacagagtcaatatggaggctatagacagggtgtac
>TU1963699
atagacagggtgtaccggtacagagtcaatgtggaggctatagacagggtgtactggtacagagtcaatgtggaggctatagacagggtgtaccagtacagagtcaatgtggaggctatagacagggtgtaccggtacagagtcaatatggaggctatagacagggtgtaccagtacagagtcaatgtggaggctatagacagggtgtaccggtacagagtcaatatggaggctatagacagggtgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1963698 False 386 lncRNA 0.49 2 19160285 19160808
TU1963699 True 249 lncRNA 0.49 2 19160285 19160808

Neighbor

gene id symbol gene type direction distance location
LOC110499902 LOC106609566 coding upstream 319825 18770248 ~ 18840460 (+)
LOC110499903 LOC106609567 coding upstream 389753 18758459 ~ 18770532 (+)
LOC110499901 LOC106609586 coding upstream 405640 18740386 ~ 18754645 (+)
LOC110499900 LOC106596632 coding upstream 426233 18726697 ~ 18734052 (+)
fut9 fut9 coding upstream 439693 18719308 ~ 18720592 (+)
LOC110501017 LOC106609562 coding downstream 62629 19223437 ~ 19226634 (+)
LOC118942896 NA coding downstream 99937 19260745 ~ 19279035 (+)
bik LOC106609559 coding downstream 141560 19302368 ~ 19306083 (+)
LOC110499913 NA coding downstream 171156 19331964 ~ 19337651 (+)
LOC118942905 NA coding downstream 224184 19384992 ~ 19388072 (+)
G1713942 NA non-coding upstream 14150 19144945 ~ 19146135 (+)
G1713834 NA non-coding upstream 273084 18886535 ~ 18887201 (+)
G1713830 NA non-coding upstream 278627 18880801 ~ 18881658 (+)
G1713825 NA non-coding upstream 288521 18870436 ~ 18871764 (+)
G1713824 NA non-coding upstream 290590 18867440 ~ 18869695 (+)
G1713953 NA non-coding downstream 13299 19174107 ~ 19176169 (+)
G1714034 NA non-coding downstream 73317 19234125 ~ 19234357 (+)
G1714035 NA non-coding downstream 74030 19234838 ~ 19235054 (+)
G1714066 LOC106576374 non-coding downstream 140017 19300825 ~ 19302229 (+)
G1714074 NA non-coding downstream 160581 19321389 ~ 19321643 (+)
G1713384 NA other upstream 422849 18734791 ~ 18737436 (+)
G1713262 NA other upstream 659411 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 892777 18247128 ~ 18268691 (+)
G1712658 NA other upstream 1491699 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 2216496 16914013 ~ 16973778 (+)
G1714090 NA other downstream 224164 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 948390 20109125 ~ 20113891 (+)
G1715392 NA other downstream 1397614 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1837790 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 3015155 22175963 ~ 22180897 (+)

Expression


Co-expression Network