G1714087



Basic Information


Item Value
gene id G1714087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19340898 ~ 19341419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1963809
ctttcaaatgactgctggacttgaacttgtttagttgttggaagAGTGTGCTTAGTATTTTCctgcttttgttctgtgtagcgctgtatttttcgtggcgtcattacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgtacgtcatctacctacattatataggtatgcacgtcatctacctacattatattggta
>TU1963810
ctttcaaatgactgctggacttgaacttgtttagttgttggaagAGTGTGCTTAGTATTTTCctgcttttgttctgtgtagcgctgtatttttcgtggcgtcattacgtcatctacctacattatataggtatgcacatcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgtacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgtacgtcatctacctacattatataggtatgcacgtcatctacctacattatattggta
>TU1963811
ctttcaaatgactgctggacttgaacttgtttagttgttggaagAGTGTGCTTAGTATTTTCctgcttttgttctgtgtagcgctgtatttttcgtggcgtcattacgtcatctacctacattatataggtatgcacatcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgcacgtcatctacctacattatataggtatgtacgtcatctacctacattatataggtatgcacgtcatctacctacattatattggta

Function


NR:

description
dynein heavy chain-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1963809 False 282 lncRNA 0.37 3 19340898 19341419
TU1963810 False 432 lncRNA 0.37 3 19340898 19341419
TU1963811 True 282 lncRNA 0.37 2 19340898 19341419

Neighbor


gene id symbol gene type direction distance location
LOC110499913 NA coding upstream 3247 19331964 ~ 19337651 (+)
bik LOC106609559 coding upstream 34815 19302368 ~ 19306083 (+)
LOC118942896 NA coding upstream 61863 19260745 ~ 19279035 (+)
LOC110501017 LOC106609562 coding upstream 114264 19223437 ~ 19226634 (+)
LOC110499902 LOC106609566 coding upstream 500438 18770248 ~ 18840460 (+)
LOC118942905 NA coding downstream 43573 19384992 ~ 19388072 (+)
LOC110499932 NA coding downstream 83974 19425393 ~ 19431499 (+)
LOC118942906 NA coding downstream 367795 19709214 ~ 19709762 (+)
LOC110499917 LOC106576387 coding downstream 400705 19742124 ~ 19752304 (+)
LOC110499934 LOC106576387 coding downstream 414490 19755909 ~ 19761293 (+)
G1714074 NA non-coding upstream 19255 19321389 ~ 19321643 (+)
G1714066 LOC106576374 non-coding upstream 38669 19300825 ~ 19302229 (+)
G1714035 NA non-coding upstream 105844 19234838 ~ 19235054 (+)
G1714034 NA non-coding upstream 106541 19234125 ~ 19234357 (+)
G1713953 NA non-coding upstream 164729 19174107 ~ 19176169 (+)
G1714082 NA non-coding downstream 12461 19353880 ~ 19354892 (+)
G1714126 LOC106609549 non-coding downstream 18767 19360186 ~ 19360889 (+)
G1714133 NA non-coding downstream 45030 19386449 ~ 19433764 (+)
G1714097 NA non-coding downstream 58618 19400037 ~ 19405559 (+)
G1714134 NA non-coding downstream 64237 19405656 ~ 19439604 (+)
G1713384 NA other upstream 603462 18734791 ~ 18737436 (+)
G1713262 NA other upstream 840024 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1073390 18247128 ~ 18268691 (+)
G1712658 NA other upstream 1672312 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 2397109 16914013 ~ 16973778 (+)
G1714090 NA other downstream 43553 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 767779 20109125 ~ 20113891 (+)
G1715392 NA other downstream 1217003 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1657179 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2834544 22175963 ~ 22180897 (+)

Expression



Co-expression Network