G1714097


Basic Information

Item Value
gene id G1714097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19400037 ~ 19405559 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1963911
ctactctgttgtcatctatgcatagtcactttaataactctacctacatgtagatactacctcaactaaccggtgccaccgcacattgactctgtatcggttcccccctgtatatagtctaactattgttattttactgctgctctttaattacttgttacttttatctcttatccgTACTTTTAAAGCTGTGTTTTTGGTTAGGgctctcgtaagtaagcattgctctgtaaggtctactacatctgttgtactcggcgcatgtgattagtaacatttgttttgatttgatttgctggttgAAGATGATGTGGTTTCAAGTGAGAACATAAATAACTAAGCAATGACATTCAGGCCTGATAGTTTTCAAGGAAACTGTGAATCAGGCTTGATTACTGTATGTCTATACCATTCAACAACATTTAAGACTGCAGTTTAATTATTAAAAGAGACAACAGAAATATGTGTTCCAAAGGGAAATCTTTATTTTCATCTATTCATCAAAGCATCAAAGCAAACATTCCTACAGTATCTAATAGTAACAAAACAGAACTCATCAAATCTAATACCGATTCAATCTCAGTCTACAGAGAGGACTGACACATGAACTCAAGCAAAGCCCCCTGTTACTCGACATGTCAGTGATCAAAAGACAGAGAACATCTGATCTCAGAACAGAGTCAAAGCAGAGGAACCAGCAGCCTCTCTCCACAGGGGTGTGTGACTAGGGGGCCTACCCAGAACAGTCAGCCCGCCTCAAGGtcttggtgactggagtctgggAATTCTGCTGGGCTTCACAGGTCACCTCTCCTGCCTTGGTCCACTCCAGGCCAGTGAGAGTCAGGGTGCTGCTCCAGCTGTACAGGCCATCCTTCTCCAGGACCCTAGAACTGGCCTCCTGCTTCTGGCTGGTCCCGTCCACTTTCCAGCTCAAGGTCCAGTCTGAGGGGAAGCCCTTGTTGGCCAGACACGTCAGTGTGGCTGTTGTTGTACTGGACAGTTCCTCTCTAGCGGGGGACAGGACAGTGAGGGTGGGGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1963911 True 1042 lncRNA 0.45 2 19400037 19405559

Neighbor

gene id symbol gene type direction distance location
LOC118942905 NA coding upstream 11965 19384992 ~ 19388072 (+)
LOC110499913 NA coding upstream 62386 19331964 ~ 19337651 (+)
bik LOC106609559 coding upstream 93954 19302368 ~ 19306083 (+)
LOC118942896 NA coding upstream 121002 19260745 ~ 19279035 (+)
LOC110501017 LOC106609562 coding upstream 173403 19223437 ~ 19226634 (+)
LOC110499932 NA coding downstream 19834 19425393 ~ 19431499 (+)
LOC118942906 NA coding downstream 303655 19709214 ~ 19709762 (+)
LOC110499917 LOC106576387 coding downstream 336565 19742124 ~ 19752304 (+)
LOC110499934 LOC106576387 coding downstream 350350 19755909 ~ 19761293 (+)
LOC110499918 LOC106609536 coding downstream 358103 19763662 ~ 19784185 (+)
G1714126 LOC106609549 non-coding upstream 39148 19360186 ~ 19360889 (+)
G1714082 NA non-coding upstream 45145 19353880 ~ 19354892 (+)
G1714087 NA non-coding upstream 58618 19340898 ~ 19341419 (+)
G1714074 NA non-coding upstream 78394 19321389 ~ 19321643 (+)
G1714066 LOC106576374 non-coding upstream 97808 19300825 ~ 19302229 (+)
G1714134 NA non-coding downstream 97 19405656 ~ 19439604 (+)
G1714090 NA non-coding downstream 45345 19384972 ~ 19754609 (+)
G1714151 NA non-coding downstream 70337 19475896 ~ 19478051 (+)
G1714154 NA non-coding downstream 82241 19487800 ~ 19533266 (+)
G1714172 NA non-coding downstream 185932 19591491 ~ 19593431 (+)
G1713384 NA other upstream 662601 18734791 ~ 18737436 (+)
G1713262 NA other upstream 899163 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1132529 18247128 ~ 18268691 (+)
G1712658 NA other upstream 1731451 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 2456248 16914013 ~ 16973778 (+)
nmes1 nmes1 other downstream 703639 20109125 ~ 20113891 (+)
G1715392 NA other downstream 1152863 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1593039 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2770404 22175963 ~ 22180897 (+)
G1717516 NA other downstream 3313360 22718919 ~ 22784445 (+)

Expression


Co-expression Network