G1714530


Basic Information

Item Value
gene id G1714530
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19533728 ~ 19540675 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964456
ATTTATTTAGTCCTATCGTGTGCTGTGTTTTGCTTTCTTTCTTATTTACTTATTTGATTGACTTCCTTTGAATTGGTTAACGCCTTTTGGGTGCTCTTCTCGTTGAGTGAATGAGGGAAGGAGTGTGTTAGTTAGGGACCTGAACCACAACCCCCACACCTGAGGAGTATTGGGGTTAATGAGCTGCCCTGCACAAAGGCAGCTCAGACAATGTTCAGGACATTCAAGCCAGCAACGGGAGAGGATAGGTGCCCCAGACTGTGGCTACATCACTGCTGTGTCTGGAGAGAAGAAACCAGATGAGTGTGACACTGCTCGGGAAGAGCCGAACAGAACGTgatgacacattggtgtggctagcTTCAGGGTTAAGCGAACAGTGTGTCAAGAAGTGGTGTGGCTTCgcagggttgtgttttggaggacgcatggctctcaacctttgaCTGTCCCGAGtccataggggagttgcagcgatcggacaagactgtaactaccaattggatatcacaaaattagGGACAACAAATATAATAGTAACTCTTCTGAAGTTTACTCTCGTAtacccaagtacttctctgcagctgccaccacaaaaTCTTTTCTCTGTGGTTAACGTTCCATTTCTGCGGTATAGTTGACAACCATTGCTATGAACGCTAAGAAGACAACCTTACTAAAGCATAACTCACATGTTTCCTTATCCCTCTGTGCTGGCACACATCCTCTATTCTCAGGATACCTCACCTATTGTATTATACTAGTAATGCAGTGCTATGAGTCCCTACTGCATTATACTAGTAATTCAGTACTATGATTCCCTTCTGCATTACACTAGTAGTTCAGTTCTATCAGTCCCTGTGGGtgtggtcatctatgaacatttgaacatcttggccatgttctgttataatctccacccggcaaagCTAGAAGAggtctggccacccctcatagcctggttcctctttaggtttcttcctaggttctggcctttctagggagtttgtcctagccaccgtgcttctacacatgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtaagaagggctttataaatacatttgatttgatttgttacctAATAAATGTCTGACTCTCCGTACCTGCTTCTCCTGTCCGGCGTCAGTCCTtacagtttgcaactgttggatgAATGATTACACGCTAGGTCAgcaagatgcaggcaagagtgtgcaaggcggtattgaatgtgtcactgtctgtccatgtgtcactgtcaccTCAAATCTTTCTCTCGAGCTGTGTGCACCTATATTGAATTCATAGGCTAGGTAGTAggaacctcatgatgggtatagggaaaatgcaAGTAATATTTAGTAGCCTAAACCAATCTATGttaaactgggtgaatggaatatgaatgacagtcatccaatatgctgtaacagaaataaggccatgctcataataaaacataatcatcctccctcatcttaaatggcaccgaccgccactgttTAGTTCAGTCAGTGGTCCATGTCACTGTCTCTTCCCCCTGGCTGAACATCTGGTGACAGTGCTGGTCTATTCTGGGACAAGCAGAACCACCCAGCCCTGTCTATGTAAATCTCAGTTTCACTCCTACAGCTCCCAGTCTACCAGTTGACCAGTTTCACTCCCTGATATACCCTGGACTTGGACTGATGTGAGGGAGGTGACTGATTTGATCCTCTATGGCGGATTCAGGGAGGGACACATAACAGATAAGGCACCAAGTAATTAATGACAGATAAAAAATAATTATACTTCACGatgatagtgtgtagtgtatgtctCTATGTAAATGTGTCTCATGTTTGAGCCCAGCATCCTGTCTCATTCACAGATCTAACAGCTCATGAAAAGGGTTAATACATGCTAGTTGATCACATCAATAGCTGGTTGTGAAGTGCATGTAGGGATTTGGTTTGAGGGGCTGATGATGATTTAACATCACTTTTCTTTTACTTCTGTAGATCTTACTCTGCATATGGACTGGTAATGTGTTTCAAAACGTCTAATAACTTTCATACACACTTCCAGTTCATTACCAATATAACAAGATACAACCATGATgatgatattaatgatgatgatgatgaggacgaTAATGAGGACGTTGGAGAACGTGTGATTTGTATCATGCGTTCTAACCATTTTCAAAGTTGACCTGCTCAGTGTTCCATGTCACTGTCTCTTCCTGCAGTAGGTCCCAGCTGTAGCAGTACTGtcactgtgcagtctgactgagggaggtttTTGTACGACTTCAGACAGTATTCCCTGCAATGCTTCGGCTGTTAATTCCTGAAGACCCAAAAACCTTTCAGCTGCAGATACAATTATGTCCAGTTACTTGGAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964456 True 2426 lncRNA 0.44 2 19533728 19540675

Neighbor

gene id symbol gene type direction distance location
LOC118942998 LOC106576333 coding downstream 137660 19393748 ~ 19396068 (-)
LOC110499916 LOC106609549 coding downstream 170577 19355510 ~ 19363151 (-)
LOC110499914 LOC106609550 coding downstream 178997 19351820 ~ 19354731 (-)
LOC110501020 LOC106609550 coding downstream 185465 19337875 ~ 19348263 (-)
LOC110499911 LOC106576376 coding downstream 212845 19310298 ~ 19320883 (-)
LOC118942907 NA coding upstream 144579 19684836 ~ 19700486 (-)
LOC110499938 LOC106609532 coding upstream 281576 19822222 ~ 19831727 (-)
LOC110499939 LOC106609539 coding upstream 293068 19833743 ~ 19842238 (-)
LOC110501023 LOC106576392 coding upstream 303216 19843806 ~ 19858976 (-)
LOC110499951 NA coding upstream 416566 19957241 ~ 19962354 (-)
G1714497 NA non-coding downstream 5799 19518853 ~ 19527929 (-)
G1714477 NA non-coding downstream 6964 19524345 ~ 19526764 (-)
G1714498 NA non-coding downstream 14133 19454484 ~ 19519595 (-)
G1714472 NA non-coding downstream 20819 19495238 ~ 19512909 (-)
G1714522 NA non-coding downstream 31692 19480521 ~ 19502036 (-)
G1714467 NA non-coding upstream 9273 19549948 ~ 19740732 (-)
G1714537 NA non-coding upstream 33075 19573750 ~ 19612125 (-)
G1714471 NA non-coding upstream 36202 19576877 ~ 19579737 (-)
G1714540 NA non-coding upstream 45266 19585941 ~ 19632097 (-)
G1714545 NA non-coding upstream 53549 19594224 ~ 19633616 (-)
G1714475 NA other downstream 80050 19400335 ~ 19453678 (-)
G1713755 NA other downstream 767924 18765460 ~ 18766379 (-)
G1713719 NA other downstream 864403 18668834 ~ 18669325 (-)
G1713637 NA other downstream 928211 18519287 ~ 18605517 (-)
G1713604 NA other downstream 1062911 18470513 ~ 18470817 (-)
G1714470 NA other upstream 63496 19599461 ~ 19617954 (-)
G1714755 NA other upstream 362110 19902785 ~ 19903457 (-)
G1715085 LOC106609522 other upstream 453996 19994671 ~ 19995602 (-)
G1715091 LOC106576402 other upstream 470635 20011310 ~ 20025695 (-)
LOC118942908 LOC106609500 other upstream 1003414 20544089 ~ 20545776 (-)

Expression


Co-expression Network