G1714490


Basic Information

Item Value
gene id G1714490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19645705 ~ 19653641 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964411
ATTTAGTCCTATCGTGTGCTGTGTTTTGGTTTCTTTCTTATTTACTTATTTGATTGACTTCCTTTGAATTAGTTAACGCCTTTTGAGTGCTCTTCTCGTTGAGTGAATGAGGGAAGGAGTGTGTTAGTTAGGGACCTGAACCACAACCCCCACACCTGAGGAGTATTGGGGTTAATGAGCTTCCCTGCACAAATGCAGCTCAGACAATGTTCAGGACATTCAAGCCAGCAACGGGAGAGGATAGGTGCCCCAGACTGTGGCTACATCACTGCTGTGTCTGGAGAGAATAAACCAGATGAGTGTGACACTGCTCGGGAAGAGCCGAACAGAACGTgatgacacattggtgtggctagcTTCAGGGTTAATCGAACAGTGTGTCAAGAAGTGGTGTGGCTTCgcagggttgtgttttggaggacacatggctctcaacctttgactctcccgagtccataggggagttgcagcgatcggacaagactgtaactaccaattggatatcacaaaattagGGACAACAAATATAATAGTAACTCTTCTGAAGTTTACTCTCGTAtacccaagtacttctctgcagctgccaccacaaaaTATTTTCTCTGTGATTTACGTTCCATTTCTGCGGTATAGTTGATAACCATTGCCATGAACGCTAAGAAGACAACCTTACTAAAGCATAACTCACATGTTGCCTTATCCCTCTGTGCTGGCACACATCCTCTGTTCTCAGGATACCTCACATATTGTATTATACTAGTAATGCAGTACTATGATTCCCTTCTGCATTACACTAGTAGTTCAGTTCTATCAGTCCCTGTGGGtgtggtcatctatgaacatttgaacatcttggccatgttctcttataatctccacccggcacagccagaagaggtcttgccacccctcatagcctggttcctctttaggtttcttcctaggttctggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggagtgttaaaatgggtttctgtacagcactttgagatatcagctgatgtaagaagggctttataaatacatttgatttgatttgttccctAATAAATGTTTGACTCTCCGTACCTGCTTCTCCTGTCCGGCGTCAGTCCTtacagtttgcaactgttggactaatgattgcaCGCTaggtgtaagggcgttcgtctgtaggaggaagagaagcggaccaaagcgcagcgtggtggttattcatgttttaataaatcgctacacatgaacaaactaacaaaaacaagaaatgtgaaaacgcaaaacagtcctatcctgtgacaccaaacacagtgacaggaacaatcacccacaaacacacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaaacatagaaatgccccaaaacatagaaaaacaaacatagactgcccacccaactcacgccctgaccatactaaataattacaaaacaacagaaatagaggtcagaacgtgacactaggtcagctagatgcaggcaagagtgtgcaaggcggtattgaatgtgtcactgtcacctCAAATCTTTCTCTCGAGCTGTGTGCACCTATATTGAATTCATAGGCTAGGTGGTTGggaacctcatgatgggtatagggaaaatgcaAGTAATATTTAGTAGCCTAAACCAATCTATGttaaactgggtgaatggaatatgaatgacagtcatccaatatgctgtaacagaaataaggccatgctcatattAAATAataatcatcctccctcatcttaaatggcaccgaccgccactgttTAGTTCAGTCAGTGGTCCATGTCACTGTCTCTTCCCCCTGGCTGAACATCTGGTGACAGTGCTGGTCTATTCTGGGACAAGCAGAACCACCCAGCCCTGTCTATGTAAATCTCAGTTTCACTCCTACAGCTCCCAGTCTACCAGTTGACCAGTTTCACTCCCTGACATACCCTGGACTGGGACTGATGTGAGGGAGGTGACTGATTTTATCCTCTATGGCGGATTCAGGGAGGGACACATAACAGATAAGGCACCAAGTAATTAATGACAGATAAAAAATAATTATACTTCACGatgatagtgtgtagtgtatgtctCTATGTAAATGTGTCTCATGTTTGAGCCCAGCATCCTGTCTCATTCACAGATCTAACAGCTCATGGAAAGGGTTAATACATGCTAGTTGATCACATCAATAGCTGGTTGTGAAGTGCATGTAGGGATTTGGTTTGAGGGGCTGATGATGATTTAACATCACTTTTCTTTTACTTCTGTAGATCTTACTCTGCATATGGACTGGTAATGTGTTTCAAAACGTCTAATAACTTTCATACACACTTTCAGTTCATTACCAATATAACAAGATACAACCATGATgatgatattaatgatgatgatgatgaggacgaTAATGAGGACGTTGGAGAACGTGTGATTTGTATCATGCGTTCTAACCATTTTCAAAGTTGACCTGCTCAGTGTTCCATGTCACTGTCTCTTCCTGCAGTAGGTCCCAGCTGTAGCAGTACTGtcactgtgcagtctgactgagggaggtttTTGTACGACTTCAGACAGTATTCCCTGCAATGCTTCGGCTGTTAATTCCTGAAGACCCAAAAACCTTTCAGCTGCAGATACAATTATGTCCAGTTTCTTGGATTTCTTGTTCGTTTGGGCAGTACAATTTATCACCTGCACAATAAATGCCTCAAAATACACCTTCTCAGGATCAGTGTATCAGGATCCTTCTCAggctctggggcggcagggtagcctagtggttagagctttggactagtaaccgaaaggttgcaagttcaaatccctgagctgacaaggtacaaatctgtcgttctgcccctggacaggcactgttcctatgccgtcattgaaaataagaatttgttcttagaaagatacactgcttctttatgcaaccgctctgttacatttctttttaacgttacagaaatcgcacactattcaatatatctgagacggcgctcagttccaagctacatttctacgtaatgttggagtcaacagaaacacagatttaagcataaatattcccttaccttcgatggtcttcgttcagaatgttctggaagggttcatacttacccaatacatcgtttggtttcaagtcttgcgtctttgtattagctactgctaataacatcagctgaaatgcacccaaaacgtcctccggtccggataagttgcgcatcaaaacttcaaaattacacattatatgtcgactaaacaggtcaaactaagtgcagaagcaagctttatgatgttttagacgtgcaaaacaaacttcaattcaaccgagcatcgtttgctcttcccaggagtactggaacaaaggaatggctgtgaccaattcgcgccctaacgcacaggtttttttatcgcgacacttactccaatcactcctatagggccaattctcgcgcgatttgaacgattgaacgctccaaagaaagaggacatctagtggaagagatggaaagtgtccccagatccataagtggtcgggaagggtgggggccatgacgtcaaagttgctccaactttcatggccacaaaaactagtttggaagaatgcatgccctgtgagttctgctatacttacagacataattccaacggttttagaagctttagagtgttttctatccaataataattattatatgcatatattagcaattttttataatttttttttcagttttctaggggtacccaatttctccaaagggggcgtaaatctgccatgTCCTAAACAggtgacttgcctggttaaaaaaaggttaaaaaggttaaaaaaataaaaatccactGCCATAGGTTCCTCTGCTCAACTCCTACAACTATTTCCACCTCCTCCGTGTAAGAGACCTGTTGAAGAGGTTTGTGTGAGCAGCAGCATTTTAAAGGTTGGGGCTGATTGTCCAGGCAATCATGACCCTGATTGGTGAACTAGATTTAACTGGGCTAAATTAGAGTCTGGCAAGTTGCTGGAAGGTTCTAGCAGGAGAGCGGTCTTGCTCTTGACCGAACCTCACGTTGTTTTAGGGGCTTATAACTGTGTTATACCATCTCAATAAATATGGATGAATCTTTGCTTGAAATTCACTTCCTGACAGAGGGATCTTACAGAGACTGGGGATTTTGTTCTGAAATGATGTGAGACACTTGTTGTTGCACAGAGTCCATTCAACGTATTATGTGACATGTAAAGGCAATGTTTACATATGAACTACAGCAACATAAAAGGAATACTAATGCAATCTGGACATATGGGTGTTATCACCTAAGGAATGATTTAACATGAAGGTGGATGAGTTGACATTACTGTCAGCATCACTGATATATTTAGCTCAGTGTATTTTAGTTCAGCCAGTGTTCCATGTCACTGTCTCTTCATCATCAGCACCTGCAGTAGGTCCCAGCTGTATCAGTACAGtcactgtgcagtctgactgagggaggtttTTGTACGACTCTGTATCACTGTGTGAACACTCCATCACTGTGGAAACTctgacagtagtaatctcctgcatcttcagcctggactccactgatggtcagagtgaagtcactcccagatccactgcCACTGAATCTAGATGGAGTCCCAGACTGAAGTGTTGTAGCATAGTAAATAAGGAGTTTAGGAGCTCCTCCAGGTTTCTGTTGGTACCAGGCTAGGTATTCATAAAAAAACAAAGCATGAACATCACTGCTGGTTTTACAGTTCAGAGAGACTGTCTGTTCTGGGAGAACAGCTTTCACTGCAGGAGTCTGTGTCACAACGTACTGTCCTCTGGattctgaaaaataaaaaataaacatttctatAAATTAAATATTACATATTGTAATGAATAGTTCTGAATAGAAATATTAACATTGATATACTCTACATGTAAACACTATAGATTAAATGAATCTTCAACAATTCATTCTGAAAACTGTTACCTTGAAAGCAGAAAACAAGTGTCCAGATGAATATGGTGATAAAagtcatggttgttgtgggttctgtTGTCATGAAGAACAGCTCTCAGTCATGAAGTGTTAAACTCACAGGGATATAAATACTATTAGAGCAGTGGAGCAGATGCATTATGCAAATCCATGTTTCAAATCTATTTCAGTTTTCAAGTAGGTTCCAGTTATTGGAGTATTTTATCCTTCATGTCACAGCTTTTCTATCAAACAGCAACTGTTTACTCAGATAACTAATGTATGGTAACTTTTATGTCACACCACCATTATATTATTATTCTGATGATGATCAGAtataatcaaatgttattggtgacatacacatggttagcagatgttaatgcgagtgtagcgaaatgtttgtgcttct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964411 True 5489 lncRNA 0.42 2 19645705 19653641

Neighbor

gene id symbol gene type direction distance location
LOC118942998 LOC106576333 coding downstream 249637 19393748 ~ 19396068 (-)
LOC110499916 LOC106609549 coding downstream 282554 19355510 ~ 19363151 (-)
LOC110499914 LOC106609550 coding downstream 290974 19351820 ~ 19354731 (-)
LOC110501020 LOC106609550 coding downstream 297442 19337875 ~ 19348263 (-)
LOC110499911 LOC106576376 coding downstream 324822 19310298 ~ 19320883 (-)
LOC118942907 NA coding upstream 31613 19684836 ~ 19700486 (-)
LOC110499938 LOC106609532 coding upstream 168610 19822222 ~ 19831727 (-)
LOC110499939 LOC106609539 coding upstream 180102 19833743 ~ 19842238 (-)
LOC110501023 LOC106576392 coding upstream 190250 19843806 ~ 19858976 (-)
LOC110499951 NA coding upstream 303600 19957241 ~ 19962354 (-)
G1714549 NA non-coding downstream 8918 19614010 ~ 19636787 (-)
G1714545 NA non-coding downstream 12089 19594224 ~ 19633616 (-)
G1714540 NA non-coding downstream 13608 19585941 ~ 19632097 (-)
G1714537 NA non-coding downstream 33580 19573750 ~ 19612125 (-)
G1714547 NA non-coding downstream 34284 19610691 ~ 19611421 (-)
G1714493 NA non-coding upstream 69575 19723216 ~ 19725258 (-)
G1714578 NA non-coding upstream 70505 19724146 ~ 19727204 (-)
G1714603 LOC106576387 non-coding upstream 103079 19756720 ~ 19756952 (-)
G1714605 LOC106576387 non-coding upstream 104517 19758158 ~ 19758859 (-)
G1714470 NA other downstream 27751 19599461 ~ 19617954 (-)
G1714475 NA other downstream 192027 19400335 ~ 19453678 (-)
G1713755 NA other downstream 879901 18765460 ~ 18766379 (-)
G1713719 NA other downstream 976380 18668834 ~ 18669325 (-)
G1713637 NA other downstream 1040188 18519287 ~ 18605517 (-)
G1714755 NA other upstream 249144 19902785 ~ 19903457 (-)
G1715085 LOC106609522 other upstream 341030 19994671 ~ 19995602 (-)
G1715091 LOC106576402 other upstream 357669 20011310 ~ 20025695 (-)
LOC118942908 LOC106609500 other upstream 890448 20544089 ~ 20545776 (-)
LOC100301658 LOC100301658 other upstream 1797476 21451117 ~ 21452490 (-)

Expression


Co-expression Network