G1714115


Basic Information

Item Value
gene id G1714115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19688596 ~ 19689332 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1963929
CACTTGCTTTCTGCTTCCAAGAATCCAGAGGACAGTACGTTGTGACACAGACTCCGGTAGTGAAAGCTGTTCTCCCAGAACAGACAGTCTCTCTGAACTGTAAAACCAGCAGTAATGTGTATTCTAATAACTATCTAGACTGGTACCAACAGAAACCTGGAGGAGCTCCTAAACTCCTTATTTACTATGCTACAACACTTCAGTCTGGGACTCCATCTAGATTCAGTGgcagtggatctgggagtgacttcactctgaccatcagtggagtccaggctgaagatgcaggagattactactgtcagagttaccactacatcattagtaaagatgtgttcacacagtgatacagagacgtacaaaaacctccctcagtcagactgcacagtgaCTGTACTGATACAGCTGGGACCTACTGCAGGTGCTTAGGGGGAAGAGACATTGACATGGAACACTGACTGAACTAAATTACACTGAGCTAAATACATCAGTGATGATGTCTATAATGTAAACTTATCCCAGGTGCTGAGGGGAAGACAGTGACATGGAACACTGATCAGTAGAAGAGGTCAACTTTGAGTATTTTTACAAAGCATCATTCAGATCACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1963929 True 610 lncRNA 0.44 2 19688596 19689332

Neighbor

gene id symbol gene type direction distance location
LOC110499932 NA coding upstream 257097 19425393 ~ 19431499 (+)
LOC118942905 NA coding upstream 300524 19384992 ~ 19388072 (+)
LOC110499913 NA coding upstream 350945 19331964 ~ 19337651 (+)
bik LOC106609559 coding upstream 382513 19302368 ~ 19306083 (+)
LOC118942896 NA coding upstream 409561 19260745 ~ 19279035 (+)
LOC118942906 NA coding downstream 19882 19709214 ~ 19709762 (+)
LOC110499917 LOC106576387 coding downstream 52792 19742124 ~ 19752304 (+)
LOC110499934 LOC106576387 coding downstream 66577 19755909 ~ 19761293 (+)
LOC110499918 LOC106609536 coding downstream 74330 19763662 ~ 19784185 (+)
LOC110499935 LOC106609535 coding downstream 108147 19797479 ~ 19806872 (+)
G1714196 NA non-coding upstream 5562 19677937 ~ 19683034 (+)
G1714172 NA non-coding upstream 95165 19591491 ~ 19593431 (+)
G1714154 NA non-coding upstream 155330 19487800 ~ 19533266 (+)
G1714151 NA non-coding upstream 210545 19475896 ~ 19478051 (+)
G1714134 NA non-coding upstream 248992 19405656 ~ 19439604 (+)
G1714210 NA non-coding downstream 23373 19712705 ~ 19735869 (+)
G1714612 NA non-coding downstream 95050 19784382 ~ 19784728 (+)
G1714613 NA non-coding downstream 97347 19786679 ~ 19787340 (+)
G1714619 NA non-coding downstream 103556 19792888 ~ 19793165 (+)
G1714090 NA other upstream 64682 19384972 ~ 19754609 (+)
G1713384 NA other upstream 951160 18734791 ~ 18737436 (+)
G1713262 NA other upstream 1187722 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1421088 18247128 ~ 18268691 (+)
G1712658 NA other upstream 2020010 17666280 ~ 17668586 (+)
nmes1 nmes1 other downstream 419866 20109125 ~ 20113891 (+)
G1715392 NA other downstream 869090 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1309266 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2486631 22175963 ~ 22180897 (+)
G1717516 NA other downstream 3029587 22718919 ~ 22784445 (+)

Expression


Co-expression Network