G1714210


Basic Information

Item Value
gene id G1714210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19712705 ~ 19735869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964031
ggtgtgttgagtggtggtGTCCTGCCAGGTCGTTGGCATGGTGCAGGAGTAGATGGGGTCAAAGTAGTAGaaatggggtagtgggttttaATGGGTAGGTGGTAGCTGAAGAGAAGTACCTGGTGTATGAGGTTTTACACTAGAACAGTTAATGGGGTGATTTTTGTTTGTATGAAATAGTGgtatgtagggttagttggtggtgcaaGTTTGTCCTTTCAGGAACAGGAATAATAAAGATAATTTAATGTTGATATTGTAGGCAGTGACTGGCCTTACAATTTAGTACAGTAGGGGGCGGTGTGTACACCTTTAAATTAGATGTGATCCTctaacccaatcccaaagaagaagagcTCTTCAACTACAGTTTCCCTGAGGGACCAATGGTCTGTTTGCATAGAGAGAACACTTTGCTTCAGTGCTCTGGGAGTGTTTATAGCCCTGTGAGTTTAACACTTCATGACTGAGAGCTGTTCTTCATGACAacagaacccacaacaaccatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964031 True 509 lncRNA 0.43 2 19712705 19735869

Neighbor

gene id symbol gene type direction distance location
LOC118942906 NA coding upstream 2943 19709214 ~ 19709762 (+)
LOC110499932 NA coding upstream 281206 19425393 ~ 19431499 (+)
LOC118942905 NA coding upstream 324633 19384992 ~ 19388072 (+)
LOC110499913 NA coding upstream 375054 19331964 ~ 19337651 (+)
bik LOC106609559 coding upstream 406622 19302368 ~ 19306083 (+)
LOC110499917 LOC106576387 coding downstream 6255 19742124 ~ 19752304 (+)
LOC110499934 LOC106576387 coding downstream 20040 19755909 ~ 19761293 (+)
LOC110499918 LOC106609536 coding downstream 27793 19763662 ~ 19784185 (+)
LOC110499935 LOC106609535 coding downstream 61610 19797479 ~ 19806872 (+)
LOC110499937 LOC106609533 coding downstream 74682 19810551 ~ 19818578 (+)
G1714115 NA non-coding upstream 23373 19688596 ~ 19689332 (+)
G1714196 NA non-coding upstream 29671 19677937 ~ 19683034 (+)
G1714172 NA non-coding upstream 119274 19591491 ~ 19593431 (+)
G1714154 NA non-coding upstream 179439 19487800 ~ 19533266 (+)
G1714151 NA non-coding upstream 234654 19475896 ~ 19478051 (+)
G1714612 NA non-coding downstream 48513 19784382 ~ 19784728 (+)
G1714613 NA non-coding downstream 50810 19786679 ~ 19787340 (+)
G1714619 NA non-coding downstream 57019 19792888 ~ 19793165 (+)
G1714620 NA non-coding downstream 57388 19793257 ~ 19793527 (+)
G1714090 NA other upstream 88791 19384972 ~ 19754609 (+)
G1713384 NA other upstream 975269 18734791 ~ 18737436 (+)
G1713262 NA other upstream 1211831 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1445197 18247128 ~ 18268691 (+)
G1712658 NA other upstream 2044119 17666280 ~ 17668586 (+)
nmes1 nmes1 other downstream 373329 20109125 ~ 20113891 (+)
G1715392 NA other downstream 822553 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1262729 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2440094 22175963 ~ 22180897 (+)
G1717516 NA other downstream 2983050 22718919 ~ 22784445 (+)

Expression


Co-expression Network