Gene
RNA
| Item | Value |
|---|---|
| gene id | G1714613 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 19786679 ~ 19787340 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1964556 | True | 662 | lncRNA | 0.39 | 1 | 19786679 | 19787340 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499918 | LOC106609536 | coding | upstream | 2494 | 19763662 ~ 19784185 (+) |
| LOC110499934 | LOC106576387 | coding | upstream | 25386 | 19755909 ~ 19761293 (+) |
| LOC110499917 | LOC106576387 | coding | upstream | 34375 | 19742124 ~ 19752304 (+) |
| LOC118942906 | NA | coding | upstream | 76917 | 19709214 ~ 19709762 (+) |
| LOC110499932 | NA | coding | upstream | 355180 | 19425393 ~ 19431499 (+) |
| LOC110499935 | LOC106609535 | coding | downstream | 10139 | 19797479 ~ 19806872 (+) |
| LOC110499937 | LOC106609533 | coding | downstream | 23211 | 19810551 ~ 19818578 (+) |
| LOC110499940 | LOC106609531 | coding | downstream | 73814 | 19861154 ~ 19885723 (+) |
| LOC110499945 | LOC106609530 | coding | downstream | 105137 | 19892477 ~ 19900807 (+) |
| LOC110499950 | LOC106609529 | coding | downstream | 116245 | 19903585 ~ 19907504 (+) |
| G1714612 | NA | non-coding | upstream | 1951 | 19784382 ~ 19784728 (+) |
| G1714210 | NA | non-coding | upstream | 50810 | 19712705 ~ 19735869 (+) |
| G1714184 | NA | non-coding | upstream | 58918 | 19631947 ~ 19727761 (+) |
| G1714619 | NA | non-coding | downstream | 5548 | 19792888 ~ 19793165 (+) |
| G1714620 | NA | non-coding | downstream | 5917 | 19793257 ~ 19793527 (+) |
| G1714654 | cl011 | non-coding | downstream | 62027 | 19849367 ~ 19851600 (+) |
| G1714674 | NA | non-coding | downstream | 99724 | 19887064 ~ 19887326 (+) |
| G1714675 | NA | non-coding | downstream | 101982 | 19889322 ~ 19889531 (+) |
| G1714090 | NA | other | upstream | 162765 | 19384972 ~ 19754609 (+) |
| G1713384 | NA | other | upstream | 1049243 | 18734791 ~ 18737436 (+) |
| G1713262 | NA | other | upstream | 1285805 | 18497147 ~ 18500874 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | upstream | 1519171 | 18247128 ~ 18268691 (+) |
| G1712658 | NA | other | upstream | 2118093 | 17666280 ~ 17668586 (+) |
| nmes1 | nmes1 | other | downstream | 321858 | 20109125 ~ 20113891 (+) |
| G1715392 | NA | other | downstream | 771082 | 20558422 ~ 20558751 (+) |
| LOC110499980 | LOC106576426 | other | downstream | 1211258 | 20954576 ~ 21004439 (+) |
| G1717161 | LOC106576319 | other | downstream | 2388623 | 22175963 ~ 22180897 (+) |
| G1717516 | NA | other | downstream | 2931579 | 22718919 ~ 22784445 (+) |
