G1714619


Basic Information

Item Value
gene id G1714619
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19792888 ~ 19793165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964562
tcgcaaggctgccggcccagacggcatccctagctgcgtcctcagagcatgcgcagacaagctggctggtgtgtttacggacatattcaatcaatccttatcccagtctgctgttcccacatgcttcaagagggccaccattgttccagttcccaagaaagctaaggtaactgagctaaatgactatcgccctgtagcactcacctctgtcatcatgaagtgctttgagagactagtcaaggatcatatcaccgccaccctacctgacaccctagacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964562 True 278 lncRNA 0.52 1 19792888 19793165

Neighbor

gene id symbol gene type direction distance location
LOC110499918 LOC106609536 coding upstream 8703 19763662 ~ 19784185 (+)
LOC110499934 LOC106576387 coding upstream 31595 19755909 ~ 19761293 (+)
LOC110499917 LOC106576387 coding upstream 40584 19742124 ~ 19752304 (+)
LOC118942906 NA coding upstream 83126 19709214 ~ 19709762 (+)
LOC110499932 NA coding upstream 361389 19425393 ~ 19431499 (+)
LOC110499935 LOC106609535 coding downstream 4314 19797479 ~ 19806872 (+)
LOC110499937 LOC106609533 coding downstream 17386 19810551 ~ 19818578 (+)
LOC110499940 LOC106609531 coding downstream 67989 19861154 ~ 19885723 (+)
LOC110499945 LOC106609530 coding downstream 99312 19892477 ~ 19900807 (+)
LOC110499950 LOC106609529 coding downstream 110420 19903585 ~ 19907504 (+)
G1714613 NA non-coding upstream 5548 19786679 ~ 19787340 (+)
G1714612 NA non-coding upstream 8160 19784382 ~ 19784728 (+)
G1714210 NA non-coding upstream 57019 19712705 ~ 19735869 (+)
G1714115 NA non-coding upstream 103556 19688596 ~ 19689332 (+)
G1714620 NA non-coding downstream 92 19793257 ~ 19793527 (+)
G1714654 cl011 non-coding downstream 56202 19849367 ~ 19851600 (+)
G1714674 NA non-coding downstream 93899 19887064 ~ 19887326 (+)
G1714675 NA non-coding downstream 96157 19889322 ~ 19889531 (+)
G1714666 NA non-coding downstream 109889 19903054 ~ 19903389 (+)
G1714090 NA other upstream 168974 19384972 ~ 19754609 (+)
G1713384 NA other upstream 1055452 18734791 ~ 18737436 (+)
G1713262 NA other upstream 1292014 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1525380 18247128 ~ 18268691 (+)
G1712658 NA other upstream 2124302 17666280 ~ 17668586 (+)
nmes1 nmes1 other downstream 316033 20109125 ~ 20113891 (+)
G1715392 NA other downstream 765257 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1205433 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2382798 22175963 ~ 22180897 (+)
G1717516 NA other downstream 2925754 22718919 ~ 22784445 (+)

Expression


Co-expression Network