G1714759



Basic Information


Item Value
gene id G1714759
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19902406 ~ 19902628 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1964732
CAGCTGTGCTACTTCAAAGAGCTGCGGGTGGACTACCACTGTCATCTCGACAGGTACCTGCTAGGTGTCCCAGGCGGTATCCCAGAGGAGAGGATTTCCCATGCCATAGGGGAGATCCTCCACAATGGCTTGGGCCAAAAGGTGTGTCCCATTAGCACCTTCTCTGTGGAAGAGGTCAACGCAGCCTCACAAAGGATGGTGCGGTCGTCCCACTCCAGCTGGC

Function


NR:

description
protein SSUH2 homolog

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1964732 True 223 lncRNA 0.57 1 19902406 19902628

Neighbor


gene id symbol gene type direction distance location
LOC110501023 LOC106576392 coding downstream 43430 19843806 ~ 19858976 (-)
LOC110499939 LOC106609539 coding downstream 60168 19833743 ~ 19842238 (-)
LOC110499938 LOC106609532 coding downstream 70679 19822222 ~ 19831727 (-)
LOC118942907 NA coding downstream 212593 19684836 ~ 19700486 (-)
LOC118942998 LOC106576333 coding downstream 506338 19393748 ~ 19396068 (-)
LOC110499951 NA coding upstream 54613 19957241 ~ 19962354 (-)
LOC110499944 LOC106576402 coding upstream 103872 20006500 ~ 20013479 (-)
LOC110499943 LOC106609521 coding upstream 116563 20019191 ~ 20025740 (-)
LOC110499960 LOC106609516 coding upstream 398812 20301440 ~ 20334668 (-)
LOC110499961 LOC106576411 coding upstream 432566 20335194 ~ 20360136 (-)
G1714707 NA non-coding downstream 438 19901010 ~ 19901968 (-)
G1714752 NA non-coding downstream 14209 19887900 ~ 19888197 (-)
G1714638 NA non-coding downstream 107064 19795078 ~ 19795342 (-)
G1714726 NA non-coding upstream 11790 19914418 ~ 19946439 (-)
G1714780 NA non-coding upstream 34193 19936821 ~ 19937164 (-)
G1715068 NA non-coding upstream 70832 19973460 ~ 19973692 (-)
G1715082 NA non-coding upstream 89669 19992297 ~ 19992887 (-)
G1715084 NA non-coding upstream 91192 19993820 ~ 19994022 (-)
G1714470 NA other downstream 284452 19599461 ~ 19617954 (-)
G1714475 NA other downstream 448728 19400335 ~ 19453678 (-)
G1713755 NA other downstream 1136602 18765460 ~ 18766379 (-)
G1713719 NA other downstream 1233081 18668834 ~ 18669325 (-)
G1713637 NA other downstream 1296889 18519287 ~ 18605517 (-)
G1714755 NA other upstream 157 19902785 ~ 19903457 (-)
G1715085 LOC106609522 other upstream 92043 19994671 ~ 19995602 (-)
G1715091 LOC106576402 other upstream 108682 20011310 ~ 20025695 (-)
LOC118942908 LOC106609500 other upstream 641461 20544089 ~ 20545776 (-)
LOC100301658 LOC100301658 other upstream 1548489 21451117 ~ 21452490 (-)

Expression



Co-expression Network