G1714755


Basic Information

Item Value
gene id G1714755
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19902785 ~ 19903457 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964728
GAAAAATTATTTTTCACATTTGTATAAATACATTATGACATCATAAATATCATTTTAGAATTGGAATAGAGTAAACTGAGAAATAATGGGATTTGAACATTTTGCTAATTCATTAACATGAAACTCAAGTTACAGCATTGCTCTTAACTTCCATATAATGGCAACTGAACATCGAAAGGGTTACCGATGTGACCTCATACTGgaaccctctcagtactccacaGTTCCACCACCAACGGAGGAGGGGAAGGCAAAGGTATCAGTGAAACTTCAGCCAGAGGTTTTTAACCCATTCATCCTGTCTCCTCTGCCAGAACAGACGATCCGTGATGTTCTTGTTGACTGGGTGAGGAACAAACCGCTCCTTTCACCCACTGCAGCCAGAGGAATGGTCATCACTGGCATAACCCATGAGGTTGCATACTGTTACAGACTGGAAACATTTACAGAGCACAGGTCTGTGTGCTTAAGATTTGAACCGCAATGCAAAACTTCCAAAGCACCAGTGTCTCCAAAACCAGCAGGGGAAGTACAGGAGCCACAACCCTGGAAGGTGCCTGTGACCCCGGCCAAGATGTTCCACAACCAGGTGTTAAATTACAGGCTGATTCACACAGACCGAGTGACCGGGTGCTCTTACTGCCAGGAGCATAAGTGGGTTATGTGCAAGGCC

Function

NR:

description
protein SSUH2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964728 True 673 TUCP 0.45 1 19902785 19903457

Neighbor

gene id symbol gene type direction distance location
LOC110501023 LOC106576392 coding downstream 43809 19843806 ~ 19858976 (-)
LOC110499939 LOC106609539 coding downstream 60547 19833743 ~ 19842238 (-)
LOC110499938 LOC106609532 coding downstream 71058 19822222 ~ 19831727 (-)
LOC118942907 NA coding downstream 212972 19684836 ~ 19700486 (-)
LOC118942998 LOC106576333 coding downstream 506717 19393748 ~ 19396068 (-)
LOC110499951 NA coding upstream 53784 19957241 ~ 19962354 (-)
LOC110499944 LOC106576402 coding upstream 103043 20006500 ~ 20013479 (-)
LOC110499943 LOC106609521 coding upstream 115734 20019191 ~ 20025740 (-)
LOC110499960 LOC106609516 coding upstream 397983 20301440 ~ 20334668 (-)
LOC110499961 LOC106576411 coding upstream 431737 20335194 ~ 20360136 (-)
G1714759 NA non-coding downstream 157 19902406 ~ 19902628 (-)
G1714707 NA non-coding downstream 817 19901010 ~ 19901968 (-)
G1714752 NA non-coding downstream 14588 19887900 ~ 19888197 (-)
G1714726 NA non-coding upstream 10961 19914418 ~ 19946439 (-)
G1714780 NA non-coding upstream 33364 19936821 ~ 19937164 (-)
G1715068 NA non-coding upstream 70003 19973460 ~ 19973692 (-)
G1715082 NA non-coding upstream 88840 19992297 ~ 19992887 (-)
G1715084 NA non-coding upstream 90363 19993820 ~ 19994022 (-)
G1714470 NA other downstream 284831 19599461 ~ 19617954 (-)
G1714475 NA other downstream 449107 19400335 ~ 19453678 (-)
G1713755 NA other downstream 1136981 18765460 ~ 18766379 (-)
G1713719 NA other downstream 1233460 18668834 ~ 18669325 (-)
G1713637 NA other downstream 1297268 18519287 ~ 18605517 (-)
G1715085 LOC106609522 other upstream 91214 19994671 ~ 19995602 (-)
G1715091 LOC106576402 other upstream 107853 20011310 ~ 20025695 (-)
LOC118942908 LOC106609500 other upstream 640632 20544089 ~ 20545776 (-)
LOC100301658 LOC100301658 other upstream 1547660 21451117 ~ 21452490 (-)
LOC110499990 lhfpl3 other upstream 1594200 21496754 ~ 21533441 (-)

Expression


Co-expression Network