G1714666


Basic Information

Item Value
gene id G1714666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19903054 ~ 19903389 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964627
TGCCAGTGATGACCATTCCTCTGGCTGCAGTGGGTGAAAGGAGCGGTTTGTTCCTCACCCAGTCAACAAGAACATCACGGATCGTCTGTTCTGGCAGAGGAGACAGGATGAATGGGTTAAAAACCTCTGGCTGAAGTTTCACTGATACCTTTGCCTTCCCCTCCTCCGTTGGTGGTGGAACtgtggagtactgagagggttcCAGTATGAGGTCACATCGGTAACCCTTTCGATGTTCAGTTGCCATTATATGGAAGTTAAGAGCAATGCTGTAACTTGAGTTTCATGTTAATGAATTAGCAAAATGTTCAAATCCCATTATTTCTCAGTTTACTC

Function

NR:

description
protein SSUH2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964627 True 336 lncRNA 0.46 1 19903054 19903389

Neighbor

gene id symbol gene type direction distance location
LOC110499945 LOC106609530 coding upstream 2247 19892477 ~ 19900807 (+)
LOC110499940 LOC106609531 coding upstream 17331 19861154 ~ 19885723 (+)
LOC110499937 LOC106609533 coding upstream 84476 19810551 ~ 19818578 (+)
LOC110499935 LOC106609535 coding upstream 96182 19797479 ~ 19806872 (+)
LOC110499918 LOC106609536 coding upstream 118869 19763662 ~ 19784185 (+)
LOC110499950 LOC106609529 coding downstream 196 19903585 ~ 19907504 (+)
ube2n LOC106609528 coding downstream 4310 19907699 ~ 19910772 (+)
LOC110499949 LOC106609526 coding downstream 20401 19923790 ~ 19934601 (+)
LOC110499941 pkp2 coding downstream 36062 19939451 ~ 19951917 (+)
LOC110499946 LOC106609525 coding downstream 49125 19952514 ~ 19956800 (+)
G1714675 NA non-coding upstream 13523 19889322 ~ 19889531 (+)
G1714674 NA non-coding upstream 15728 19887064 ~ 19887326 (+)
G1714654 cl011 non-coding upstream 51454 19849367 ~ 19851600 (+)
G1714620 NA non-coding upstream 109527 19793257 ~ 19793527 (+)
G1714619 NA non-coding upstream 109889 19792888 ~ 19793165 (+)
G1714679 NA non-coding downstream 9458 19912847 ~ 19913157 (+)
LOC110499947 LOC106576403 non-coding downstream 70073 19973446 ~ 20008614 (+)
G1714825 NA non-coding downstream 92960 19996349 ~ 19996552 (+)
G1714813 NA non-coding downstream 96245 19999634 ~ 20000255 (+)
G1714826 NA non-coding downstream 97535 20000924 ~ 20001199 (+)
G1714090 NA other upstream 279140 19384972 ~ 19754609 (+)
G1713384 NA other upstream 1165618 18734791 ~ 18737436 (+)
G1713262 NA other upstream 1402180 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1635546 18247128 ~ 18268691 (+)
G1712658 NA other upstream 2234468 17666280 ~ 17668586 (+)
nmes1 nmes1 other downstream 205809 20109125 ~ 20113891 (+)
G1715392 NA other downstream 655033 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 1095209 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2272574 22175963 ~ 22180897 (+)
G1717516 NA other downstream 2815530 22718919 ~ 22784445 (+)

Expression


Co-expression Network