G1714726


Basic Information

Item Value
gene id G1714726
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19914418 ~ 19946439 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964696
tcctagtaaaaaatgtcctgtcttaggtcagttaggatcaccactttactttaagaatgtgaaatgtcagaataatagagataattatttaattcagcttatttctttcatcacattcccaaagggtcagaagtttatatacactcaattagcatttggtaacattgccattaaattgtttaacttgggtcaaacgtttcgggtagccttccgcaagcttcccacaataagttgggtgaattttggcccattcctcctgacagagcttgtgtaactgagtcaggtttgtaggcctccttgctcgcacacgctttttcagttctgccaacaaattttggcaggtcagggctgtgtgatggccactccaataccttgactttgttgtccttaagccattttgccacaattttggaagtatgcttggggtccaattggaagaaccatttgcaaccaagctttaacttcctgactgatgtcttgaaatgttgcttcaatatatccacaattttccatcctcatgatgccatctattttgtgaagtgcaccagtccctcctgcagcaaagcacccccacaacacgatgctgccacgcccgtgcttcacggttgggacggtgctcttcggcttgcaggcctcccctttttcctccaaacataatgatggtcattatggctaaacggttccatttttgtttcatcagaacagaggacatttctccaaaaagtattatctttgtccccatgtgcagttgcaaaccgtagtctggcttttttatggcggttttggagcattggcttcgtccttgctgagcggcctttcaggttatgtcgatataggacttgttttactgtggatatagatactgttaTACCCGTTTCctcagcatcttcacacggtcatttgctgttgttctgggattgatttgcacttttccgcACTAAAGAATGTGtcttcttcctgagtggtatgacagctgtgtggtctcatggtgttgatacttgcatactattgtttgtacagatgaacgtggtaccttcaggcatttggaaattgctcccaaggatgaaccagacttgtgggtgtctacaatgttttttctgaggtcctggctgatttattttgattttcccatgatgtcaagcaaagaggcaatgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaattatattaattagcctttcagaagcttctaaagccaagacataattttctggaattttccaagtggtttaaaggcacaatcaacttagtgtatgtaaacttctgacccactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaatgacttgtgttatgcacaaagtagatgtccgaaccgacttaccaaaactatagtttgttaacaagaaatttgcgcagtggttgaaaaactagttttaatgactccaacataaggttatgtaaacttccgacttcaacggtaTATAGTGCTATTTCTATTGTTTTAATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964696 True 1549 lncRNA 0.41 2 19914418 19946439

Neighbor

gene id symbol gene type direction distance location
LOC110501023 LOC106576392 coding downstream 55442 19843806 ~ 19858976 (-)
LOC110499939 LOC106609539 coding downstream 72180 19833743 ~ 19842238 (-)
LOC110499938 LOC106609532 coding downstream 82691 19822222 ~ 19831727 (-)
LOC118942907 NA coding downstream 224605 19684836 ~ 19700486 (-)
LOC118942998 LOC106576333 coding downstream 518350 19393748 ~ 19396068 (-)
LOC110499951 NA coding upstream 10802 19957241 ~ 19962354 (-)
LOC110499944 LOC106576402 coding upstream 60061 20006500 ~ 20013479 (-)
LOC110499943 LOC106609521 coding upstream 72752 20019191 ~ 20025740 (-)
LOC110499960 LOC106609516 coding upstream 355001 20301440 ~ 20334668 (-)
LOC110499961 LOC106576411 coding upstream 388755 20335194 ~ 20360136 (-)
G1714759 NA non-coding downstream 11790 19902406 ~ 19902628 (-)
G1714707 NA non-coding downstream 12450 19901010 ~ 19901968 (-)
G1714752 NA non-coding downstream 26221 19887900 ~ 19888197 (-)
G1715068 NA non-coding upstream 27021 19973460 ~ 19973692 (-)
G1715082 NA non-coding upstream 45858 19992297 ~ 19992887 (-)
G1715084 NA non-coding upstream 47381 19993820 ~ 19994022 (-)
G1715087 NA non-coding upstream 54520 20000959 ~ 20001190 (-)
G1715089 NA non-coding upstream 55345 20001784 ~ 20002261 (-)
G1714755 NA other downstream 10961 19902785 ~ 19903457 (-)
G1714470 NA other downstream 296464 19599461 ~ 19617954 (-)
G1714475 NA other downstream 460740 19400335 ~ 19453678 (-)
G1713755 NA other downstream 1148614 18765460 ~ 18766379 (-)
G1713719 NA other downstream 1245093 18668834 ~ 18669325 (-)
G1715085 LOC106609522 other upstream 48232 19994671 ~ 19995602 (-)
G1715091 LOC106576402 other upstream 64871 20011310 ~ 20025695 (-)
LOC118942908 LOC106609500 other upstream 597650 20544089 ~ 20545776 (-)
LOC100301658 LOC100301658 other upstream 1504678 21451117 ~ 21452490 (-)
LOC110499990 lhfpl3 other upstream 1551218 21496754 ~ 21533441 (-)

Expression


Co-expression Network