G1715085 (LOC106609522)



Basic Information


Item Value
gene id G1715085
gene name LOC106609522
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 19994671 ~ 19995602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1965105
CAAAGCTGACCTGTAGTTTCTTGCTGGACTGTCCCAGTGAGCGGTCCACAGCCCTGCTGCTGCTCTCCAGCTGCACTCTGTGTTGAACCTGCTGCTCCAGCTCCGCCCTGACCTTCCTCAGCTGGGCCCAGGCCTCCTCCTCGTCCACCTGCCTGCTCTGCTCAGTCTCCTGCTCCAGGCCAGCCTCCATGCCCTGGATACGGGTCAGGTACTCCCCCAGTCGGGCTTCACACTCCCGCACCCGTCCAATCAGCTCCTGGAGCTGCTCCCTCAGCTGCCGCTCGCTCTCCTGCTCGATCTGCAGCTCGTTCTGCCAGAACTCCTCCTCGGACATCTCCACCTCATTCCTCCGCAGCTGCTGCTCCAGACGCACCAGCTCCTCCTCCAGCACGCCAATGCCCTCCTGACCCTCAATGCACATGCCAACATCACCGCTCTCACAGCCGTGTAGCTCTGCCTCGGAGCCCTGCAGCCTGCTCTCCAGTAGCTGGAGCTTGTCCTTCTGCAGCTGGACCAGGCACACCAGCTCCCGGGCTGGACTGAGGGGCACAGACACCACCCCCCTGCCCTGGTTCAGTGCTCTCTGCTGCTGCTTGGCCTCGGCATCTCTGCCCTTCCCAAAAATATCCCTCAAGCCCTTGGCCGTGAAGGTGAGGGACTTACGCTTGGGCTCCCGACGCTTGAGCGAGCGGTCATTGGCCGATGGGCGCAGCTTGGCCAGAGGAGGCAGGCTCTGGCGGTAGAGGCCGCGCTCGGGCACACGGGATGCACCGTCGGAGTTGGGACATTCGCTGAGGGAGGGGCCGGTGCGCTGGAGAACCAGCTGCACGTCGCTGGCATACTGGCCCCACATGTTGAGGGACACCACAGGGTTTTCATGCGGGGCCAAGTGACGTTCCGTCTCCCGCCATCTCTCGATCAATGTGTACCTG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1965105 True 932 TUCP 0.63 1 19994671 19995602

Neighbor


gene id symbol gene type direction distance location
LOC110499951 NA coding downstream 32317 19957241 ~ 19962354 (-)
LOC110501023 LOC106576392 coding downstream 135695 19843806 ~ 19858976 (-)
LOC110499939 LOC106609539 coding downstream 152433 19833743 ~ 19842238 (-)
LOC110499938 LOC106609532 coding downstream 162944 19822222 ~ 19831727 (-)
LOC118942907 NA coding downstream 304858 19684836 ~ 19700486 (-)
LOC110499944 LOC106576402 coding upstream 10898 20006500 ~ 20013479 (-)
LOC110499943 LOC106609521 coding upstream 23589 20019191 ~ 20025740 (-)
LOC110499960 LOC106609516 coding upstream 305838 20301440 ~ 20334668 (-)
LOC110499961 LOC106576411 coding upstream 339592 20335194 ~ 20360136 (-)
LOC110499964 LOC106609512 coding upstream 420797 20416399 ~ 20419086 (-)
G1715084 NA non-coding downstream 649 19993820 ~ 19994022 (-)
G1715082 NA non-coding downstream 1784 19992297 ~ 19992887 (-)
G1715068 NA non-coding downstream 20979 19973460 ~ 19973692 (-)
G1714726 NA non-coding downstream 48232 19914418 ~ 19946439 (-)
G1714780 NA non-coding downstream 57507 19936821 ~ 19937164 (-)
G1715087 NA non-coding upstream 5357 20000959 ~ 20001190 (-)
G1715089 NA non-coding upstream 6182 20001784 ~ 20002261 (-)
G1715092 NA non-coding upstream 8512 20004114 ~ 20006281 (-)
G1715098 NA non-coding upstream 31313 20026915 ~ 20027148 (-)
G1715114 NA non-coding upstream 55711 20051313 ~ 20051554 (-)
G1714755 NA other downstream 91214 19902785 ~ 19903457 (-)
G1714470 NA other downstream 376717 19599461 ~ 19617954 (-)
G1714475 NA other downstream 540993 19400335 ~ 19453678 (-)
G1713755 NA other downstream 1228867 18765460 ~ 18766379 (-)
G1713719 NA other downstream 1325346 18668834 ~ 18669325 (-)
G1715091 LOC106576402 other upstream 15708 20011310 ~ 20025695 (-)
LOC118942908 LOC106609500 other upstream 548487 20544089 ~ 20545776 (-)
LOC100301658 LOC100301658 other upstream 1455515 21451117 ~ 21452490 (-)
LOC110499990 lhfpl3 other upstream 1502055 21496754 ~ 21533441 (-)
G1716815 NA other upstream 1768937 21764539 ~ 21765210 (-)

Expression



Co-expression Network