G1714829


Basic Information

Item Value
gene id G1714829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 20002279 ~ 20002499 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964811
gagaacttgttctcaactggcctacctggttaaataaaggtggcaGTTTTTGCgacggcacttgaagaaactttcaaagttcttgaacttttccggattgactgaacttcatgtcttaaagtaatgatggactgtcatttctctttgcttatttgagctgttcttgctgtaATATGgccttggtattttaccaaatagggctattttctgtgtaccacccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964811 True 221 lncRNA 0.40 1 20002279 20002499

Neighbor

gene id symbol gene type direction distance location
LOC110499946 LOC106609525 coding upstream 45479 19952514 ~ 19956800 (+)
LOC110499941 pkp2 coding upstream 50362 19939451 ~ 19951917 (+)
LOC110499949 LOC106609526 coding upstream 67678 19923790 ~ 19934601 (+)
ube2n LOC106609528 coding upstream 91507 19907699 ~ 19910772 (+)
LOC110499950 LOC106609529 coding upstream 94775 19903585 ~ 19907504 (+)
LOC110499953 NA coding downstream 52667 20055166 ~ 20092114 (+)
nmes1 nmes1 coding downstream 106626 20109125 ~ 20113891 (+)
LOC110499954 LOC106609519 coding downstream 123099 20125598 ~ 20176686 (+)
LOC110499956 LOC106576407 coding downstream 190609 20193108 ~ 20196983 (+)
LOC110499957 LOC106609518 coding downstream 217936 20220435 ~ 20255165 (+)
G1714826 NA non-coding upstream 1080 20000924 ~ 20001199 (+)
G1714813 NA non-coding upstream 2024 19999634 ~ 20000255 (+)
G1714825 NA non-coding upstream 5727 19996349 ~ 19996552 (+)
G1714679 NA non-coding upstream 89122 19912847 ~ 19913157 (+)
G1714666 NA non-coding upstream 98890 19903054 ~ 19903389 (+)
G1714885 NA non-coding downstream 72488 20074987 ~ 20075187 (+)
G1714887 NA non-coding downstream 73321 20075820 ~ 20076033 (+)
G1714922 NA non-coding downstream 116024 20118523 ~ 20118795 (+)
G1714940 NA non-coding downstream 179335 20181834 ~ 20182196 (+)
G1715010 NA non-coding downstream 331794 20334293 ~ 20334621 (+)
G1714090 NA other upstream 378365 19384972 ~ 19754609 (+)
G1713384 NA other upstream 1264843 18734791 ~ 18737436 (+)
G1713262 NA other upstream 1501405 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1734771 18247128 ~ 18268691 (+)
G1712658 NA other upstream 2333693 17666280 ~ 17668586 (+)
G1715392 NA other downstream 555923 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 996099 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2173464 22175963 ~ 22180897 (+)
G1717516 NA other downstream 2716420 22718919 ~ 22784445 (+)

Expression


Co-expression Network