Gene
RNA
| Item | Value |
|---|---|
| gene id | G1715138 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 20055181 ~ 20055388 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1965168 | True | 208 | lncRNA | 0.53 | 1 | 20055181 | 20055388 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499943 | LOC106609521 | coding | downstream | 29441 | 20019191 ~ 20025740 (-) |
| LOC110499944 | LOC106576402 | coding | downstream | 41702 | 20006500 ~ 20013479 (-) |
| LOC110499951 | NA | coding | downstream | 92827 | 19957241 ~ 19962354 (-) |
| LOC110501023 | LOC106576392 | coding | downstream | 196205 | 19843806 ~ 19858976 (-) |
| LOC110499939 | LOC106609539 | coding | downstream | 212943 | 19833743 ~ 19842238 (-) |
| LOC110499960 | LOC106609516 | coding | upstream | 246052 | 20301440 ~ 20334668 (-) |
| LOC110499961 | LOC106576411 | coding | upstream | 279806 | 20335194 ~ 20360136 (-) |
| LOC110499964 | LOC106609512 | coding | upstream | 361011 | 20416399 ~ 20419086 (-) |
| LOC110499972 | LOC106609508 | coding | upstream | 416648 | 20472036 ~ 20476741 (-) |
| pex26 | LOC106609506 | coding | upstream | 425934 | 20481322 ~ 20484937 (-) |
| G1715114 | NA | non-coding | downstream | 3627 | 20051313 ~ 20051554 (-) |
| G1715098 | NA | non-coding | downstream | 28033 | 20026915 ~ 20027148 (-) |
| G1715092 | NA | non-coding | downstream | 48900 | 20004114 ~ 20006281 (-) |
| G1715089 | NA | non-coding | downstream | 52920 | 20001784 ~ 20002261 (-) |
| G1715087 | NA | non-coding | downstream | 53991 | 20000959 ~ 20001190 (-) |
| G1715139 | NA | non-coding | upstream | 1553 | 20056941 ~ 20057226 (-) |
| G1715142 | NA | non-coding | upstream | 6184 | 20061572 ~ 20061803 (-) |
| G1715143 | NA | non-coding | upstream | 6587 | 20061975 ~ 20062694 (-) |
| G1715144 | NA | non-coding | upstream | 7432 | 20062820 ~ 20063034 (-) |
| G1715145 | NA | non-coding | upstream | 9147 | 20064535 ~ 20067009 (-) |
| G1715091 | LOC106576402 | other | downstream | 29486 | 20011310 ~ 20025695 (-) |
| G1715085 | LOC106609522 | other | downstream | 59579 | 19994671 ~ 19995602 (-) |
| G1714755 | NA | other | downstream | 151724 | 19902785 ~ 19903457 (-) |
| G1714470 | NA | other | downstream | 437227 | 19599461 ~ 19617954 (-) |
| G1714475 | NA | other | downstream | 601503 | 19400335 ~ 19453678 (-) |
| LOC118942908 | LOC106609500 | other | upstream | 488701 | 20544089 ~ 20545776 (-) |
| LOC100301658 | LOC100301658 | other | upstream | 1395729 | 21451117 ~ 21452490 (-) |
| LOC110499990 | lhfpl3 | other | upstream | 1442269 | 21496754 ~ 21533441 (-) |
| G1716815 | NA | other | upstream | 1709151 | 21764539 ~ 21765210 (-) |
| G1716873 | NA | other | upstream | 1802051 | 21857439 ~ 21863447 (-) |
