G1715145


Basic Information

Item Value
gene id G1715145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 20064535 ~ 20067009 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1965175
tGGGATTATAATAGATTTAGTTGTCATTTATTTGTCACtaacgtcaaagtggaatgaaaaataaaactaatatactgtatcttGATTAGatgagtattcaaccccctgagtcagtactgtacatgtaagaaacgcctttggcagcgattacagttgtgagtctttctgagtaagtctctaagtctcagggctttgcacacctggatagtgcaatatttgcacatgaatcttttcttcaagctctgtcaagctgGTTGTTGATCAATGCTAGACAGCTTTGAAtaccaatttaagtcaaaactgtaactaggccactcagcaacattcaatgttgtcttggtaagcaatcAGTGTATATTtgcccttgtgttttaggttattgtcctgtctggggaaaagcagactgaaccaggttttcctctagaattttgcctgtgcttagctctattccatttatttttatcataaaaacagatcctagtccttgccgatgacaagcatacccataacatgatgcagccatcaaaaaaatatatgatgagtggtactcagtgatgtgttgtgttggatttaccccaaacctaacactttgtattcaggacagaaagttcatatctttgccacattttatacagttttactttagtgccttattgcaaacatgatgcatgttttggaatatgttttattctgtaaaggcttccttcttttcagtatgtcaattaggttagtattgtggagtaactataatgttgttgatccatcctcagttttctcctttcacagccattgtttctattttaaagtcaccattggcctcatggtgaaatccctgaggggtttccttcctctctggcaactgaattaggaaggacacctgtatctttgtagtgactgggtgcattgataaACCCAGGATCAAGGATATTCAACGtctgctttttgttgttgttgccatctaccaataggtgcccttctttgtgaggcattggaagacctccctggtctttgtggttgaatctgttcttgaaattcactgctcgaatgAGGTAacttatagataattgtatgtgtggggtacagagatgaggtagtcattaaaaaatcatgttaaacactattattgctcacagaatgagtccatgcaacttattatgtgacttgttaagccaattgttactcctgaacttatttaggcttgccataacacaggggtttaatacttattgactgaagacactTCAGCTTTGAATTTTTTacgaatttgtaaacattttgaaaaacataattacactttgaaatTACAAGGTATTGCGTGTGGACCAGTGATGAAACATCtcaatttaaattcaggctgtaacacaacaaaatgtggaaaaagtgaaggggtgtgaatactttctgaaagtacTGTATATCTGACTAGGTCAGGGTCGTTCAACCTCCGTACAGTATAACCATTAGTTCCAATGTGTCCATGATATTCGTGATCTCCTTAAGtgcatgagggtgatagtttgcagTGTGATTTCCTTCACGTTCCACTGAAGTActggaaacctttttttttataGTCTCTCACCACAACACaacgtggaaaagtcaagggggttgaatactttctgaagacaccgTGTATTATGTGTGTGGGCGTTCATGTGTTAGAGGAGTCTTGTTGTCATACAGGTCAGCTGTTACGATGCTCATAATGTCAGTGGTGCGAATGGATTTGGACATGAACGTGTTCCTGTTTGTTCATATGTTTCTGCATttccatgtactgtatgttgcgTTTCAGCTCGTTTAGTTCTTTGATTCCATTTTTGTCTTTGCACTCCAATCTTCTCTATCGTCTCAGCCGACTTTCTCCATCTGTCGTCTTTATTGGACCTCTCTGACCTTTTCTCAGTCTCTGTCCTGTGCTGTTTGCTTTTCTCAGAGTGGAGTTGCAGCTCTGTGGCGTTGCCCTTGGTTTCTCTGTTGTTAGAGCACTCCTGCCATCAATCTAACAGTGGGGAACACCGACCAAATGAATGTCAGGATTCCAAAAAGAGCAGAGAAGCCAGTCTTGtgttgcttacacacacacacacacacacacacacacacacacacacacacacacaccacaggaggctgctgaaaggaggacggctcataataatggctggaatggagtgaatggaatggcatcaaacacatggaaaccaatgtgtttaatgtatttgatgccattccaccacttccgctccagccattaccacgagcccatccttcCCAATTAAGTCAACCTCCtgtgacactcacacacacacacacacactgatcgtTATTCACAAACcaatttctctatttctctccccacTGTTGGTTTCTTGCTACTTCACGTCCTCTTTCAAGCACACAACAATCAATTACCAGGTGGATGCAAACCACAGTGCAAGTTCACTTAGAATGTTTATGCTATATAAGGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1965175 True 2475 lncRNA 0.40 1 20064535 20067009

Neighbor

gene id symbol gene type direction distance location
LOC110499943 LOC106609521 coding downstream 38795 20019191 ~ 20025740 (-)
LOC110499944 LOC106576402 coding downstream 51056 20006500 ~ 20013479 (-)
LOC110499951 NA coding downstream 102181 19957241 ~ 19962354 (-)
LOC110501023 LOC106576392 coding downstream 205559 19843806 ~ 19858976 (-)
LOC110499939 LOC106609539 coding downstream 222297 19833743 ~ 19842238 (-)
LOC110499960 LOC106609516 coding upstream 234431 20301440 ~ 20334668 (-)
LOC110499961 LOC106576411 coding upstream 268185 20335194 ~ 20360136 (-)
LOC110499964 LOC106609512 coding upstream 349390 20416399 ~ 20419086 (-)
LOC110499972 LOC106609508 coding upstream 405027 20472036 ~ 20476741 (-)
pex26 LOC106609506 coding upstream 414313 20481322 ~ 20484937 (-)
G1715144 NA non-coding downstream 1501 20062820 ~ 20063034 (-)
G1715143 NA non-coding downstream 1841 20061975 ~ 20062694 (-)
G1715142 NA non-coding downstream 2732 20061572 ~ 20061803 (-)
G1715139 NA non-coding downstream 7309 20056941 ~ 20057226 (-)
G1715138 NA non-coding downstream 9147 20055181 ~ 20055388 (-)
G1715148 NA non-coding upstream 4294 20071303 ~ 20071574 (-)
G1715149 NA non-coding upstream 5028 20072037 ~ 20072272 (-)
G1715152 NA non-coding upstream 9254 20076263 ~ 20114193 (-)
G1715172 NA non-coding upstream 48343 20115352 ~ 20115591 (-)
G1715173 NA non-coding upstream 48592 20115601 ~ 20118018 (-)
G1715091 LOC106576402 other downstream 38840 20011310 ~ 20025695 (-)
G1715085 LOC106609522 other downstream 68933 19994671 ~ 19995602 (-)
G1714755 NA other downstream 161078 19902785 ~ 19903457 (-)
G1714470 NA other downstream 446581 19599461 ~ 19617954 (-)
G1714475 NA other downstream 610857 19400335 ~ 19453678 (-)
LOC118942908 LOC106609500 other upstream 477080 20544089 ~ 20545776 (-)
LOC100301658 LOC100301658 other upstream 1384108 21451117 ~ 21452490 (-)
LOC110499990 lhfpl3 other upstream 1430648 21496754 ~ 21533441 (-)
G1716815 NA other upstream 1697530 21764539 ~ 21765210 (-)
G1716873 NA other upstream 1790430 21857439 ~ 21863447 (-)

Expression


Co-expression Network