G1714887


Basic Information

Item Value
gene id G1714887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 20075820 ~ 20076033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964875
agtggggcaaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagacaagagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagaaaaaaaatcagaaaaatcacattgtaggatttttaatgaatttatttgcaaatgatggtggaaaataagtatttggtcacctacaaccaagcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964875 True 214 lncRNA 0.34 1 20075820 20076033

Neighbor

gene id symbol gene type direction distance location
LOC110499947 LOC106576403 coding upstream 69441 19973446 ~ 20008614 (+)
LOC110499946 LOC106609525 coding upstream 119020 19952514 ~ 19956800 (+)
LOC110499941 pkp2 coding upstream 123903 19939451 ~ 19951917 (+)
LOC110499949 LOC106609526 coding upstream 141219 19923790 ~ 19934601 (+)
ube2n LOC106609528 coding upstream 165048 19907699 ~ 19910772 (+)
nmes1 nmes1 coding downstream 33092 20109125 ~ 20113891 (+)
LOC110499954 LOC106609519 coding downstream 49565 20125598 ~ 20176686 (+)
LOC110499956 LOC106576407 coding downstream 117075 20193108 ~ 20196983 (+)
LOC110499957 LOC106609518 coding downstream 144402 20220435 ~ 20255165 (+)
LOC110499958 LOC106609517 coding downstream 191664 20267697 ~ 20294996 (+)
G1714885 NA non-coding upstream 633 20074987 ~ 20075187 (+)
G1714829 NA non-coding upstream 73321 20002279 ~ 20002499 (+)
G1714826 NA non-coding upstream 74621 20000924 ~ 20001199 (+)
G1714813 NA non-coding upstream 75565 19999634 ~ 20000255 (+)
G1714922 NA non-coding downstream 42490 20118523 ~ 20118795 (+)
G1714940 NA non-coding downstream 105801 20181834 ~ 20182196 (+)
G1715010 NA non-coding downstream 258260 20334293 ~ 20334621 (+)
G1715009 LOC106609515 non-coding downstream 261065 20337098 ~ 20337621 (+)
LOC110499962 LOC106609514 non-coding downstream 315241 20364847 ~ 20392819 (+)
G1714090 NA other upstream 451906 19384972 ~ 19754609 (+)
G1713384 NA other upstream 1338384 18734791 ~ 18737436 (+)
G1713262 NA other upstream 1574946 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1808312 18247128 ~ 18268691 (+)
G1712658 NA other upstream 2407234 17666280 ~ 17668586 (+)
G1715392 NA other downstream 482389 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 922565 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 2099930 22175963 ~ 22180897 (+)
G1717516 NA other downstream 2642886 22718919 ~ 22784445 (+)

Expression


Co-expression Network