G1714940


Basic Information

Item Value
gene id G1714940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 20181834 ~ 20182196 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1964945
tcaaAATCTCCcatgtgtttcactatggtaatTCAGCCATGTaaagtttatttttgtattttatttaaccttcattcaactaggcaagtcagttaagaacaaattcttatttacaatgacagcccctaacgatgctgggccaattgtgcgctgccctatgggactcccaatcacacccagttgtgatacagcctggaatcaaaccagggtctgtagtgacgcctctaagattgagatgcagtgccttagacctctgcgccactcgggagcccaaaggTGCTGTATTGAAAAAGTTGACAGTGTTACAATTCATAACAGTAACCGCGTTTCCACCCACACCATATATAAGAAAATCacaacagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1964945 True 363 lncRNA 0.43 1 20181834 20182196

Neighbor

gene id symbol gene type direction distance location
LOC110499954 LOC106609519 coding upstream 5148 20125598 ~ 20176686 (+)
nmes1 nmes1 coding upstream 70121 20109125 ~ 20113891 (+)
LOC110499953 NA coding upstream 89720 20055166 ~ 20092114 (+)
LOC110499947 LOC106576403 coding upstream 175455 19973446 ~ 20008614 (+)
LOC110499946 LOC106609525 coding upstream 225034 19952514 ~ 19956800 (+)
LOC110499956 LOC106576407 coding downstream 10912 20193108 ~ 20196983 (+)
LOC110499957 LOC106609518 coding downstream 38239 20220435 ~ 20255165 (+)
LOC110499958 LOC106609517 coding downstream 85501 20267697 ~ 20294996 (+)
LOC110499962 LOC106609514 coding downstream 182651 20364847 ~ 20392819 (+)
LOC110499963 LOC106609510 coding downstream 221493 20403689 ~ 20414330 (+)
G1714922 NA non-coding upstream 63039 20118523 ~ 20118795 (+)
G1714887 NA non-coding upstream 105801 20075820 ~ 20076033 (+)
G1714885 NA non-coding upstream 106647 20074987 ~ 20075187 (+)
G1714829 NA non-coding upstream 179335 20002279 ~ 20002499 (+)
G1714826 NA non-coding upstream 180635 20000924 ~ 20001199 (+)
G1715010 NA non-coding downstream 152097 20334293 ~ 20334621 (+)
G1715009 LOC106609515 non-coding downstream 154902 20337098 ~ 20337621 (+)
G1715039 NA non-coding downstream 218603 20400799 ~ 20401003 (+)
G1715040 NA non-coding downstream 219393 20401589 ~ 20401806 (+)
G1714090 NA other upstream 557920 19384972 ~ 19754609 (+)
G1713384 NA other upstream 1444398 18734791 ~ 18737436 (+)
G1713262 NA other upstream 1680960 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 1914326 18247128 ~ 18268691 (+)
G1715392 NA other downstream 376226 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 816402 20954576 ~ 21004439 (+)
G1717161 LOC106576319 other downstream 1993767 22175963 ~ 22180897 (+)
G1717516 NA other downstream 2536723 22718919 ~ 22784445 (+)
G1717520 NA other downstream 2638556 22820752 ~ 22879923 (+)

Expression


Co-expression Network