Gene
RNA
| Item | Value |
|---|---|
| gene id | G1715009 |
| gene name | LOC106609515 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 20337098 ~ 20337621 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| AT-rich interactive domain-containing protein 2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1965022 | True | 346 | lncRNA | 0.56 | 3 | 20337098 | 20337621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499958 | LOC106609517 | coding | upstream | 42102 | 20267697 ~ 20294996 (+) |
| LOC110499957 | LOC106609518 | coding | upstream | 81933 | 20220435 ~ 20255165 (+) |
| LOC110499956 | LOC106576407 | coding | upstream | 140115 | 20193108 ~ 20196983 (+) |
| LOC110499954 | LOC106609519 | coding | upstream | 160412 | 20125598 ~ 20176686 (+) |
| nmes1 | nmes1 | coding | upstream | 225385 | 20109125 ~ 20113891 (+) |
| LOC110499962 | LOC106609514 | coding | downstream | 27226 | 20364847 ~ 20392819 (+) |
| LOC110499963 | LOC106609510 | coding | downstream | 66068 | 20403689 ~ 20414330 (+) |
| med21 | LOC106609513 | coding | downstream | 79866 | 20417487 ~ 20421625 (+) |
| LOC110499971 | LOC106609511 | coding | downstream | 85715 | 20423336 ~ 20432065 (+) |
| LOC110499965 | LOC106609509 | coding | downstream | 102231 | 20439852 ~ 20456984 (+) |
| G1715010 | NA | non-coding | upstream | 2477 | 20334293 ~ 20334621 (+) |
| G1714940 | NA | non-coding | upstream | 154902 | 20181834 ~ 20182196 (+) |
| G1714922 | NA | non-coding | upstream | 218303 | 20118523 ~ 20118795 (+) |
| G1714887 | NA | non-coding | upstream | 261065 | 20075820 ~ 20076033 (+) |
| G1714885 | NA | non-coding | upstream | 261911 | 20074987 ~ 20075187 (+) |
| G1715039 | NA | non-coding | downstream | 63178 | 20400799 ~ 20401003 (+) |
| G1715040 | NA | non-coding | downstream | 63968 | 20401589 ~ 20401806 (+) |
| G1714871 | NA | non-coding | downstream | 120509 | 20458130 ~ 20458523 (+) |
| G1715051 | NA | non-coding | downstream | 129457 | 20467078 ~ 20467371 (+) |
| G1714090 | NA | other | upstream | 713184 | 19384972 ~ 19754609 (+) |
| G1713384 | NA | other | upstream | 1599662 | 18734791 ~ 18737436 (+) |
| G1713262 | NA | other | upstream | 1836224 | 18497147 ~ 18500874 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | upstream | 2069590 | 18247128 ~ 18268691 (+) |
| G1715392 | NA | other | downstream | 220801 | 20558422 ~ 20558751 (+) |
| LOC110499980 | LOC106576426 | other | downstream | 660977 | 20954576 ~ 21004439 (+) |
| G1717161 | LOC106576319 | other | downstream | 1838342 | 22175963 ~ 22180897 (+) |
| G1717516 | NA | other | downstream | 2381298 | 22718919 ~ 22784445 (+) |
| G1717520 | NA | other | downstream | 2483131 | 22820752 ~ 22879923 (+) |
