G1715066


Basic Information

Item Value
gene id G1715066
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 20540230 ~ 20540450 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1965085
TCCATGAGCAGTACAGGAGTGAGGAAGCTGACCTTGGGAGACTTCGGACAGGCCTCTGTGATCACGGTTGTAggtcccctcttcttccctttgATTGATGAAAGGTCAGTCATCTTCAATATCTTTTGAGGGTAAATAGTTTGTTGGCATAGCATGGTACCCGAAGGACTAAATAAATGTCCCAATCCTATCCTGAGTCAATGACAAAACAAAAGCCTAAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106576441 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1965085 True 221 lncRNA 0.44 1 20540230 20540450

Neighbor

gene id symbol gene type direction distance location
LOC110499967 LOC106609502 coding upstream 3805 20502117 ~ 20536425 (+)
rhno1 cl032 coding upstream 38260 20499181 ~ 20501970 (+)
si:ch73-352p4.8 LOC106609505 coding upstream 45518 20486341 ~ 20494712 (+)
LOC110499965 LOC106609509 coding upstream 83246 20439852 ~ 20456984 (+)
LOC110499971 LOC106609511 coding upstream 108165 20423336 ~ 20432065 (+)
LOC110499976 LOC106609498 coding downstream 46780 20587230 ~ 20631763 (+)
LOC110499978 mtpn coding downstream 331616 20872066 ~ 20890939 (+)
LOC110499979 LOC106576425 coding downstream 391023 20931473 ~ 20943290 (+)
LOC110499980 LOC106576426 coding downstream 414126 20954576 ~ 21004439 (+)
LOC110501024 LOC106609493 coding downstream 477757 21018207 ~ 21039654 (+)
G1715053 NA non-coding upstream 70690 20469208 ~ 20469540 (+)
G1715051 NA non-coding upstream 72859 20467078 ~ 20467371 (+)
G1714871 NA non-coding upstream 81707 20458130 ~ 20458523 (+)
G1715040 NA non-coding upstream 138424 20401589 ~ 20401806 (+)
G1715039 NA non-coding upstream 139227 20400799 ~ 20401003 (+)
G1715383 NA non-coding downstream 6415 20546865 ~ 20547140 (+)
G1715696 LOC106582599 non-coding downstream 255562 20796012 ~ 20796250 (+)
G1715703 NA non-coding downstream 260170 20800620 ~ 20801129 (+)
G1715705 NA non-coding downstream 265170 20805620 ~ 20805915 (+)
G1715713 NA non-coding downstream 273855 20814305 ~ 20814522 (+)
nmes1 nmes1 other upstream 426339 20109125 ~ 20113891 (+)
G1714090 NA other upstream 916316 19384972 ~ 19754609 (+)
G1713384 NA other upstream 1802794 18734791 ~ 18737436 (+)
G1713262 NA other upstream 2039356 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 2272722 18247128 ~ 18268691 (+)
G1715392 NA other downstream 17972 20558422 ~ 20558751 (+)
G1717161 LOC106576319 other downstream 1635513 22175963 ~ 22180897 (+)
G1717516 NA other downstream 2178469 22718919 ~ 22784445 (+)
G1717520 NA other downstream 2280302 22820752 ~ 22879923 (+)

Expression


Co-expression Network