G1715383


Basic Information

Item Value
gene id G1715383
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 20546865 ~ 20547140 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1965439
ctctctctgtctctctctgtctctgtctctctctctctgtctctctctctctctgtctctctctctctgtctctctctctctgtctctctctgtctctctctctctgtctctctctgtctctctctctctgtctctctctctctctgtctctctctctctctgtctctctctgtctctctctctgtctctctctctctctctgtctctctctctctgtctctctctctctgtctctctctctctgtctctctctctctgtctctctctgtctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1965439 True 276 lncRNA 0.50 1 20546865 20547140

Neighbor

gene id symbol gene type direction distance location
LOC110499967 LOC106609502 coding upstream 10440 20502117 ~ 20536425 (+)
rhno1 cl032 coding upstream 44895 20499181 ~ 20501970 (+)
si:ch73-352p4.8 LOC106609505 coding upstream 52153 20486341 ~ 20494712 (+)
LOC110499965 LOC106609509 coding upstream 89881 20439852 ~ 20456984 (+)
LOC110499971 LOC106609511 coding upstream 114800 20423336 ~ 20432065 (+)
LOC110499976 LOC106609498 coding downstream 40090 20587230 ~ 20631763 (+)
LOC110499978 mtpn coding downstream 324926 20872066 ~ 20890939 (+)
LOC110499979 LOC106576425 coding downstream 384333 20931473 ~ 20943290 (+)
LOC110499980 LOC106576426 coding downstream 407436 20954576 ~ 21004439 (+)
LOC110501024 LOC106609493 coding downstream 471067 21018207 ~ 21039654 (+)
G1715066 NA non-coding upstream 6415 20540230 ~ 20540450 (+)
G1715053 NA non-coding upstream 77325 20469208 ~ 20469540 (+)
G1715051 NA non-coding upstream 79494 20467078 ~ 20467371 (+)
G1714871 NA non-coding upstream 88342 20458130 ~ 20458523 (+)
G1715040 NA non-coding upstream 145059 20401589 ~ 20401806 (+)
G1715696 LOC106582599 non-coding downstream 248872 20796012 ~ 20796250 (+)
G1715703 NA non-coding downstream 253480 20800620 ~ 20801129 (+)
G1715705 NA non-coding downstream 258480 20805620 ~ 20805915 (+)
G1715713 NA non-coding downstream 267165 20814305 ~ 20814522 (+)
G1715727 NA non-coding downstream 275671 20822811 ~ 20823024 (+)
nmes1 nmes1 other upstream 432974 20109125 ~ 20113891 (+)
G1714090 NA other upstream 922951 19384972 ~ 19754609 (+)
G1713384 NA other upstream 1809429 18734791 ~ 18737436 (+)
G1713262 NA other upstream 2045991 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 2279357 18247128 ~ 18268691 (+)
G1715392 NA other downstream 11282 20558422 ~ 20558751 (+)
G1717161 LOC106576319 other downstream 1628823 22175963 ~ 22180897 (+)
G1717516 NA other downstream 2171779 22718919 ~ 22784445 (+)
G1717520 NA other downstream 2273612 22820752 ~ 22879923 (+)

Expression


Co-expression Network