G1715713


Basic Information

Item Value
gene id G1715713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 20814305 ~ 20814522 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1965786
gtcagacagtcacttCCTTTTAAAGGGCCGTTTCAATCACCAAACACACATTACCTACTGCcaagggagatggagaaaaggtTGTTTGTGATTCAAGGGGTATTTTTGATTCAGTGGATAATAATGGATGCATGGTGTGTGTACTTCACGTCAAGATTCTCTCATCACATGATGTTATTGGTACCTTTGAATGTCTTATATGTGTTTTGTAGTgagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1965786 True 218 lncRNA 0.39 1 20814305 20814522

Neighbor

gene id symbol gene type direction distance location
LOC110499976 LOC106609498 coding upstream 182542 20587230 ~ 20631763 (+)
LOC110499967 LOC106609502 coding upstream 277880 20502117 ~ 20536425 (+)
rhno1 cl032 coding upstream 312335 20499181 ~ 20501970 (+)
si:ch73-352p4.8 LOC106609505 coding upstream 319593 20486341 ~ 20494712 (+)
LOC110499965 LOC106609509 coding upstream 357321 20439852 ~ 20456984 (+)
LOC110499978 mtpn coding downstream 57544 20872066 ~ 20890939 (+)
LOC110499979 LOC106576425 coding downstream 116951 20931473 ~ 20943290 (+)
LOC110499980 LOC106576426 coding downstream 140054 20954576 ~ 21004439 (+)
LOC110501024 LOC106609493 coding downstream 203685 21018207 ~ 21039654 (+)
LOC110499983 magi2 coding downstream 272832 21087354 ~ 21350552 (+)
G1715705 NA non-coding upstream 8390 20805620 ~ 20805915 (+)
G1715703 NA non-coding upstream 13176 20800620 ~ 20801129 (+)
G1715696 LOC106582599 non-coding upstream 18055 20796012 ~ 20796250 (+)
G1715383 NA non-coding upstream 267165 20546865 ~ 20547140 (+)
G1715066 NA non-coding upstream 273855 20540230 ~ 20540450 (+)
G1715727 NA non-coding downstream 8289 20822811 ~ 20823024 (+)
G1715728 NA non-coding downstream 9581 20824103 ~ 20824441 (+)
G1715743 NA non-coding downstream 19485 20834007 ~ 20834222 (+)
G1715751 NA non-coding downstream 26837 20841359 ~ 20841576 (+)
G1715752 NA non-coding downstream 27132 20841654 ~ 20841946 (+)
G1715392 NA other upstream 255554 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 700414 20109125 ~ 20113891 (+)
G1714090 NA other upstream 1190391 19384972 ~ 19754609 (+)
G1713384 NA other upstream 2076869 18734791 ~ 18737436 (+)
G1713262 NA other upstream 2313431 18497147 ~ 18500874 (+)
G1717161 LOC106576319 other downstream 1361441 22175963 ~ 22180897 (+)
G1717516 NA other downstream 1904397 22718919 ~ 22784445 (+)
G1717520 NA other downstream 2006230 22820752 ~ 22879923 (+)
G1717517 NA other downstream 2035370 22849892 ~ 22851407 (+)

Expression


Co-expression Network