G1715727


Basic Information

Item Value
gene id G1715727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 20822811 ~ 20823024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1965800
TCCTACTGCCAGCCTCAGCTCCCTATCCCCTGAGCTTCCTACTGCCAGCCTCAGCTCCCTATCCCCTGAGCTTCCTACTGCCAGCCTCAGCTACCTATCCCCTGAGCTTCCTACTGCCAGCCTTCAGTTCCATGTGACCAATGGCCCCCTCGGCCCAAAATGTTTGTCTCCCAGCTATCCTCCTCAGCCTTCTGCCTCCTGCTCAGACAAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1965800 True 214 lncRNA 0.58 1 20822811 20823024

Neighbor

gene id symbol gene type direction distance location
LOC110499976 LOC106609498 coding upstream 191048 20587230 ~ 20631763 (+)
LOC110499967 LOC106609502 coding upstream 286386 20502117 ~ 20536425 (+)
rhno1 cl032 coding upstream 320841 20499181 ~ 20501970 (+)
si:ch73-352p4.8 LOC106609505 coding upstream 328099 20486341 ~ 20494712 (+)
LOC110499965 LOC106609509 coding upstream 365827 20439852 ~ 20456984 (+)
LOC110499978 mtpn coding downstream 49042 20872066 ~ 20890939 (+)
LOC110499979 LOC106576425 coding downstream 108449 20931473 ~ 20943290 (+)
LOC110499980 LOC106576426 coding downstream 131552 20954576 ~ 21004439 (+)
LOC110501024 LOC106609493 coding downstream 195183 21018207 ~ 21039654 (+)
LOC110499983 magi2 coding downstream 264330 21087354 ~ 21350552 (+)
G1715713 NA non-coding upstream 8289 20814305 ~ 20814522 (+)
G1715705 NA non-coding upstream 16896 20805620 ~ 20805915 (+)
G1715703 NA non-coding upstream 21682 20800620 ~ 20801129 (+)
G1715696 LOC106582599 non-coding upstream 26561 20796012 ~ 20796250 (+)
G1715383 NA non-coding upstream 275671 20546865 ~ 20547140 (+)
G1715728 NA non-coding downstream 1079 20824103 ~ 20824441 (+)
G1715743 NA non-coding downstream 10983 20834007 ~ 20834222 (+)
G1715751 NA non-coding downstream 18335 20841359 ~ 20841576 (+)
G1715752 NA non-coding downstream 18630 20841654 ~ 20841946 (+)
G1715762 NA non-coding downstream 25214 20848238 ~ 20848515 (+)
G1715392 NA other upstream 264060 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 708920 20109125 ~ 20113891 (+)
G1714090 NA other upstream 1198897 19384972 ~ 19754609 (+)
G1713384 NA other upstream 2085375 18734791 ~ 18737436 (+)
G1713262 NA other upstream 2321937 18497147 ~ 18500874 (+)
G1717161 LOC106576319 other downstream 1352939 22175963 ~ 22180897 (+)
G1717516 NA other downstream 1895895 22718919 ~ 22784445 (+)
G1717520 NA other downstream 1997728 22820752 ~ 22879923 (+)
G1717517 NA other downstream 2026868 22849892 ~ 22851407 (+)

Expression


Co-expression Network