Gene
RNA
| Item | Value |
|---|---|
| gene id | G1715855 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 21012293 ~ 21015504 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1965932 | True | 240 | lncRNA | 0.53 | 2 | 21012293 | 21015504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499980 | LOC106576426 | coding | upstream | 7854 | 20954576 ~ 21004439 (+) |
| LOC110499979 | LOC106576425 | coding | upstream | 69003 | 20931473 ~ 20943290 (+) |
| LOC110499978 | mtpn | coding | upstream | 121354 | 20872066 ~ 20890939 (+) |
| LOC110499976 | LOC106609498 | coding | upstream | 380530 | 20587230 ~ 20631763 (+) |
| LOC110499967 | LOC106609502 | coding | upstream | 475868 | 20502117 ~ 20536425 (+) |
| LOC110501024 | LOC106609493 | coding | downstream | 2703 | 21018207 ~ 21039654 (+) |
| LOC110499983 | magi2 | coding | downstream | 71850 | 21087354 ~ 21350552 (+) |
| LOC110499985 | LOC106609397 | coding | downstream | 341519 | 21357023 ~ 21410835 (+) |
| LOC110499986 | LOC106576355 | coding | downstream | 410066 | 21425570 ~ 21448889 (+) |
| LOC110501025 | LOC106576014 | coding | downstream | 440341 | 21455845 ~ 21485720 (+) |
| G1715851 | NA | non-coding | upstream | 2969 | 21007162 ~ 21009324 (+) |
| G1715762 | NA | non-coding | upstream | 163778 | 20848238 ~ 20848515 (+) |
| G1715752 | NA | non-coding | upstream | 170347 | 20841654 ~ 20841946 (+) |
| G1715751 | NA | non-coding | upstream | 170717 | 20841359 ~ 20841576 (+) |
| G1715859 | NA | non-coding | downstream | 341 | 21015845 ~ 21016095 (+) |
| G1715945 | NA | non-coding | downstream | 123147 | 21138651 ~ 21139053 (+) |
| G1715966 | NA | non-coding | downstream | 151407 | 21166911 ~ 21167360 (+) |
| G1716061 | NA | non-coding | downstream | 300899 | 21316403 ~ 21316637 (+) |
| G1716078 | NA | non-coding | downstream | 405003 | 21420507 ~ 21423854 (+) |
| G1715392 | NA | other | upstream | 453542 | 20558422 ~ 20558751 (+) |
| nmes1 | nmes1 | other | upstream | 898402 | 20109125 ~ 20113891 (+) |
| G1714090 | NA | other | upstream | 1388379 | 19384972 ~ 19754609 (+) |
| G1713384 | NA | other | upstream | 2274857 | 18734791 ~ 18737436 (+) |
| G1717161 | LOC106576319 | other | downstream | 1160459 | 22175963 ~ 22180897 (+) |
| G1717516 | NA | other | downstream | 1703415 | 22718919 ~ 22784445 (+) |
| G1717520 | NA | other | downstream | 1805248 | 22820752 ~ 22879923 (+) |
| G1717517 | NA | other | downstream | 1834388 | 22849892 ~ 22851407 (+) |
| LOC110500038 | LOC106609436 | other | downstream | 1999302 | 23014617 ~ 23032420 (+) |
