G1715859


Basic Information

Item Value
gene id G1715859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 21015845 ~ 21016095 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1965936
AGTAAGTGAAAAAGATCCCGTTCATGGCCAAgtcaatttttttaaattgatatCACTGTAACATCtgcttccagctcacactctcaaacacctagatcccctgaacgtagctcactttccagctcacactctcaaacacctagatcccctgaacgcagctcactctccagattcCAATCATCTGAATTATAATCACCTGTTCACTCACCTGCAtgtcatttacacacactatttagttaagttctttgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1965936 True 251 lncRNA 0.41 1 21015845 21016095

Neighbor

gene id symbol gene type direction distance location
LOC110499980 LOC106576426 coding upstream 11406 20954576 ~ 21004439 (+)
LOC110499979 LOC106576425 coding upstream 72555 20931473 ~ 20943290 (+)
LOC110499978 mtpn coding upstream 124906 20872066 ~ 20890939 (+)
LOC110499976 LOC106609498 coding upstream 384082 20587230 ~ 20631763 (+)
LOC110499967 LOC106609502 coding upstream 479420 20502117 ~ 20536425 (+)
LOC110501024 LOC106609493 coding downstream 2112 21018207 ~ 21039654 (+)
LOC110499983 magi2 coding downstream 71259 21087354 ~ 21350552 (+)
LOC110499985 LOC106609397 coding downstream 340928 21357023 ~ 21410835 (+)
LOC110499986 LOC106576355 coding downstream 409475 21425570 ~ 21448889 (+)
LOC110501025 LOC106576014 coding downstream 439750 21455845 ~ 21485720 (+)
G1715855 NA non-coding upstream 341 21012293 ~ 21015504 (+)
G1715851 NA non-coding upstream 6521 21007162 ~ 21009324 (+)
G1715762 NA non-coding upstream 167330 20848238 ~ 20848515 (+)
G1715752 NA non-coding upstream 173899 20841654 ~ 20841946 (+)
G1715945 NA non-coding downstream 122556 21138651 ~ 21139053 (+)
G1715966 NA non-coding downstream 150816 21166911 ~ 21167360 (+)
G1716061 NA non-coding downstream 300308 21316403 ~ 21316637 (+)
G1716078 NA non-coding downstream 404412 21420507 ~ 21423854 (+)
G1715904 NA non-coding downstream 435025 21451120 ~ 21452381 (+)
G1715392 NA other upstream 457094 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 901954 20109125 ~ 20113891 (+)
G1714090 NA other upstream 1391931 19384972 ~ 19754609 (+)
G1713384 NA other upstream 2278409 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 1159868 22175963 ~ 22180897 (+)
G1717516 NA other downstream 1702824 22718919 ~ 22784445 (+)
G1717520 NA other downstream 1804657 22820752 ~ 22879923 (+)
G1717517 NA other downstream 1833797 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 1998711 23014617 ~ 23032420 (+)

Expression


Co-expression Network