G1716061


Basic Information

Item Value
gene id G1716061
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 21316403 ~ 21316637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1966159
gggatggagagtctTTGAATCAATGAGCACCGCCCAGCAACACAGGGATTATACAGCACACAGCCAGACAGTGATTCATTGGCTAACAGCAAGAGGCGCTAGAGCAGGCTGCCTGCCAGACCAGCACAGTGCTGAACAGCAACAGCCATGTTCACAGCTCTGTCTCCACCAACATGCACCATGCAGAGCTGAGCCAATGCAGAACTGCCCTGTGCCGCTGCAGGAATCCTTGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1966159 True 235 lncRNA 0.55 1 21316403 21316637

Neighbor

gene id symbol gene type direction distance location
LOC110501024 LOC106609493 coding upstream 276749 21018207 ~ 21039654 (+)
LOC110499980 LOC106576426 coding upstream 311964 20954576 ~ 21004439 (+)
LOC110499979 LOC106576425 coding upstream 373113 20931473 ~ 20943290 (+)
LOC110499978 mtpn coding upstream 425464 20872066 ~ 20890939 (+)
LOC110499976 LOC106609498 coding upstream 684640 20587230 ~ 20631763 (+)
LOC110499985 LOC106609397 coding downstream 40386 21357023 ~ 21410835 (+)
LOC110499986 LOC106576355 coding downstream 108933 21425570 ~ 21448889 (+)
LOC110501025 LOC106576014 coding downstream 139208 21455845 ~ 21485720 (+)
LOC110499987 LOC106609484 coding downstream 171785 21488422 ~ 21491605 (+)
LOC110499992 orc5 coding downstream 219323 21535960 ~ 21546505 (+)
G1715966 NA non-coding upstream 149043 21166911 ~ 21167360 (+)
G1715945 NA non-coding upstream 177350 21138651 ~ 21139053 (+)
G1715859 NA non-coding upstream 300308 21015845 ~ 21016095 (+)
G1715855 NA non-coding upstream 300899 21012293 ~ 21015504 (+)
G1715851 NA non-coding upstream 307079 21007162 ~ 21009324 (+)
G1716078 NA non-coding downstream 103870 21420507 ~ 21423854 (+)
G1715904 NA non-coding downstream 134483 21451120 ~ 21452381 (+)
G1715907 NA non-coding downstream 233904 21550541 ~ 21553761 (+)
G1716118 NA non-coding downstream 237627 21554264 ~ 21554515 (+)
G1715905 cl031 non-coding downstream 275051 21591688 ~ 21593104 (+)
G1715392 NA other upstream 757652 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 1202512 20109125 ~ 20113891 (+)
G1714090 NA other upstream 1692489 19384972 ~ 19754609 (+)
G1713384 NA other upstream 2578967 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 859326 22175963 ~ 22180897 (+)
G1717516 NA other downstream 1402282 22718919 ~ 22784445 (+)
G1717520 NA other downstream 1504115 22820752 ~ 22879923 (+)
G1717517 NA other downstream 1533255 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 1698169 23014617 ~ 23032420 (+)

Expression


Co-expression Network