G1716078


Basic Information

Item Value
gene id G1716078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 21420507 ~ 21423854 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1966176
TGTGGCTGTGGTCTCGACATAGCTCTCTGGGACCTTGGGGAAGGCATCCAGCTCCTTAACCAGACTCAGGGCTTTCTTCCTGTACAGACGCCTCATCTTCAGGACCACTCTCCACGTCCTCCCTTCATACACCTTACCTTGGTTTCATGCGTCTATACTCCGGTAAATTGATTGCAAAGCAGGTATCAATTCATAACATTATAACGAGTGAAAAAAGACGTTTGTTAGCTTCTAGCGTTCTTCACCGGGTGCTGTCTTGTTTTAGCAACACGACCACCCACTAGGC

Function

NR:

description
PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1966176 True 286 lncRNA 0.48 2 21420507 21423854

Neighbor

gene id symbol gene type direction distance location
LOC110499985 LOC106609397 coding upstream 9672 21357023 ~ 21410835 (+)
LOC110499983 magi2 coding upstream 69955 21087354 ~ 21350552 (+)
LOC110501024 LOC106609493 coding upstream 380853 21018207 ~ 21039654 (+)
LOC110499980 LOC106576426 coding upstream 416068 20954576 ~ 21004439 (+)
LOC110499979 LOC106576425 coding upstream 477217 20931473 ~ 20943290 (+)
LOC110499986 LOC106576355 coding downstream 1716 21425570 ~ 21448889 (+)
LOC110501025 LOC106576014 coding downstream 31991 21455845 ~ 21485720 (+)
LOC110499987 LOC106609484 coding downstream 64568 21488422 ~ 21491605 (+)
LOC110499992 orc5 coding downstream 112106 21535960 ~ 21546505 (+)
LOC110499994 LOC106609404 coding downstream 134687 21558541 ~ 21582813 (+)
G1716061 NA non-coding upstream 103870 21316403 ~ 21316637 (+)
G1715966 NA non-coding upstream 253147 21166911 ~ 21167360 (+)
G1715945 NA non-coding upstream 281454 21138651 ~ 21139053 (+)
G1715859 NA non-coding upstream 404412 21015845 ~ 21016095 (+)
G1715855 NA non-coding upstream 405003 21012293 ~ 21015504 (+)
G1715904 NA non-coding downstream 27266 21451120 ~ 21452381 (+)
G1715907 NA non-coding downstream 126687 21550541 ~ 21553761 (+)
G1716118 NA non-coding downstream 130410 21554264 ~ 21554515 (+)
G1715905 cl031 non-coding downstream 167834 21591688 ~ 21593104 (+)
G1716125 NA non-coding downstream 173042 21596896 ~ 21597103 (+)
G1715392 NA other upstream 861756 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 1306616 20109125 ~ 20113891 (+)
G1714090 NA other upstream 1796593 19384972 ~ 19754609 (+)
G1713384 NA other upstream 2683071 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 752109 22175963 ~ 22180897 (+)
G1717516 NA other downstream 1295065 22718919 ~ 22784445 (+)
G1717520 NA other downstream 1396898 22820752 ~ 22879923 (+)
G1717517 NA other downstream 1426038 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 1590952 23014617 ~ 23032420 (+)

Expression


Co-expression Network