G1715904


Basic Information

Item Value
gene id G1715904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 21451120 ~ 21452381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1965984
TTTTAGAATCAATTGAATTTTATTTGTCTATGTACAACAAAGCCTCTCGGGACACCCTTAACCTCCAGGTAGcgactgtgcacacacacaaggTCTAGAAATGCAAGAAATAGATAAGTACTTATACAACATGCCACTGCTACAGTAAGGAACCTAATTGAAATGGGCATATTAACTAACACATCTTGTTACAGAAGGGCTCTCGTGCATGAACAATCGCATTACTGTACTGAATAAGCATTCCATTTCCCATCCTAACCAACAGTTTATGACTTATGATCTGTTGCGTGATGAACACAATCTTTCATCAGAGGACAAGACATTCTCATTGACAAACATCCCTTGGATGCGTCACTGATCCTGTGGTGGAGAAGACTGATGTAGACAGGACAAAAGGCACACCTGGGGGTAGAGGGCACCTCATTCCTCATCGTCAGCTGGGATCCCCAGTTCCTCATCTGTCCATGCGGATGCATCAGGCCATGGGAAGTGACCCATTACTGCATCTGGGTCATGCCAGCAGTGCCACAGGATCCAGAACCACATGGCACTGCTGAGGAGCTCTGCTTGGAACGTCTGGCTCTTGGTGAGTTGTGGGAATTGCCTGTACTGGGCCTCTATGTGTGGTCCACCACCAGCTTTTCGGATTACTATTTTCTGAGGTCCACGTGTAAGAAGCTGCGTCCCGGCCCTAAGGACACCCATGGCCCTTCCTAAAGAAGACATAGTTGTTTCTCTCTTCCCCCAGTGTT

Function

NR:

description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1965984 True 752 lncRNA 0.47 3 21451120 21452381

Neighbor

gene id symbol gene type direction distance location
LOC110499986 LOC106576355 coding upstream 2231 21425570 ~ 21448889 (+)
LOC110499985 LOC106609397 coding upstream 40285 21357023 ~ 21410835 (+)
LOC110499983 magi2 coding upstream 100568 21087354 ~ 21350552 (+)
LOC110501024 LOC106609493 coding upstream 411466 21018207 ~ 21039654 (+)
LOC110499980 LOC106576426 coding upstream 446681 20954576 ~ 21004439 (+)
LOC110501025 LOC106576014 coding downstream 3464 21455845 ~ 21485720 (+)
LOC110499987 LOC106609484 coding downstream 36041 21488422 ~ 21491605 (+)
LOC110499992 orc5 coding downstream 83579 21535960 ~ 21546505 (+)
LOC110499994 LOC106609404 coding downstream 106160 21558541 ~ 21582813 (+)
LOC110499995 hcls1 coding downstream 130551 21582932 ~ 21591673 (+)
G1716078 NA non-coding upstream 27266 21420507 ~ 21423854 (+)
G1716061 NA non-coding upstream 134483 21316403 ~ 21316637 (+)
G1715966 NA non-coding upstream 283760 21166911 ~ 21167360 (+)
G1715945 NA non-coding upstream 312067 21138651 ~ 21139053 (+)
G1715859 NA non-coding upstream 435025 21015845 ~ 21016095 (+)
G1715907 NA non-coding downstream 98160 21550541 ~ 21553761 (+)
G1716118 NA non-coding downstream 101883 21554264 ~ 21554515 (+)
G1715905 cl031 non-coding downstream 139307 21591688 ~ 21593104 (+)
G1716125 NA non-coding downstream 144515 21596896 ~ 21597103 (+)
G1716154 NA non-coding downstream 193247 21645628 ~ 21645860 (+)
G1715392 NA other upstream 892369 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 1337229 20109125 ~ 20113891 (+)
G1714090 NA other upstream 1827206 19384972 ~ 19754609 (+)
G1713384 NA other upstream 2713684 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 723582 22175963 ~ 22180897 (+)
G1717516 NA other downstream 1266538 22718919 ~ 22784445 (+)
G1717520 NA other downstream 1368371 22820752 ~ 22879923 (+)
G1717517 NA other downstream 1397511 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 1562425 23014617 ~ 23032420 (+)

Expression


Co-expression Network