G1716118



Basic Information


Item Value
gene id G1716118
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 21554264 ~ 21554515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1966223
gcctggtgacatcaccaagcTGTAAATGATTTAATAGACCAATAAAAGAGTTCAAAACCTCTCGGCCAATAACAGCTAAtattcagttttcccctccctactcagacaactcccagacagtcctagcaaaattcttgcttgagaaattgctctttgacaattttaattaaaccatcacagtaaggtacttaattgttagccagaaatgatttgatattgagatttaaaaaattgctgcattggaccttaagt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1966223 True 252 lncRNA 0.36 1 21554264 21554515

Neighbor


gene id symbol gene type direction distance location
LOC110499992 orc5 coding upstream 7759 21535960 ~ 21546505 (+)
LOC110499987 LOC106609484 coding upstream 62659 21488422 ~ 21491605 (+)
LOC110501025 LOC106576014 coding upstream 68544 21455845 ~ 21485720 (+)
LOC110499986 LOC106576355 coding upstream 105375 21425570 ~ 21448889 (+)
LOC110499985 LOC106609397 coding upstream 143429 21357023 ~ 21410835 (+)
LOC110499994 LOC106609404 coding downstream 4026 21558541 ~ 21582813 (+)
LOC110499995 hcls1 coding downstream 28417 21582932 ~ 21591673 (+)
LOC110499997 LOC106576329 coding downstream 96139 21650654 ~ 21869745 (+)
LOC118942910 NA coding downstream 296431 21850946 ~ 21855948 (+)
LOC110499998 LOC106576327 coding downstream 366002 21920517 ~ 21948205 (+)
G1715907 NA non-coding upstream 503 21550541 ~ 21553761 (+)
G1715904 NA non-coding upstream 101883 21451120 ~ 21452381 (+)
G1716078 NA non-coding upstream 130410 21420507 ~ 21423854 (+)
G1716061 NA non-coding upstream 237627 21316403 ~ 21316637 (+)
G1715966 NA non-coding upstream 386904 21166911 ~ 21167360 (+)
G1715905 cl031 non-coding downstream 37173 21591688 ~ 21593104 (+)
G1716125 NA non-coding downstream 42381 21596896 ~ 21597103 (+)
G1716154 NA non-coding downstream 91113 21645628 ~ 21645860 (+)
G1716267 NA non-coding downstream 281685 21836200 ~ 21839060 (+)
G1716270 NA non-coding downstream 286766 21841281 ~ 21843712 (+)
LOC110499980 LOC106576426 other upstream 554127 20954576 ~ 21004439 (+)
G1715392 NA other upstream 995513 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 1440373 20109125 ~ 20113891 (+)
G1714090 NA other upstream 1930350 19384972 ~ 19754609 (+)
G1713384 NA other upstream 2816828 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 621448 22175963 ~ 22180897 (+)
G1717516 NA other downstream 1164404 22718919 ~ 22784445 (+)
G1717520 NA other downstream 1266237 22820752 ~ 22879923 (+)
G1717517 NA other downstream 1295377 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 1460291 23014617 ~ 23032420 (+)

Expression



Co-expression Network