G1716125


Basic Information

Item Value
gene id G1716125
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 21596896 ~ 21597103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1966230
TTGTAGTGCATCATGAATATGACCAGAATGATCTAAGGGAGCATTTGGTGTAGCCGTAGAATTAATTATTGTGATGTTTtgttttagcagatgctcttatccagagggacttacaggagcaattagggttaagtgccttgctcaaaggcacagacagatttttcacctagtcagctcagggataggaaccagcaacatttcagttact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1966230 True 208 lncRNA 0.41 1 21596896 21597103

Neighbor

gene id symbol gene type direction distance location
LOC110499995 hcls1 coding upstream 5223 21582932 ~ 21591673 (+)
LOC110499994 LOC106609404 coding upstream 14083 21558541 ~ 21582813 (+)
LOC110499992 orc5 coding upstream 50391 21535960 ~ 21546505 (+)
LOC110499987 LOC106609484 coding upstream 105291 21488422 ~ 21491605 (+)
LOC110501025 LOC106576014 coding upstream 111176 21455845 ~ 21485720 (+)
LOC110499997 LOC106576329 coding downstream 53551 21650654 ~ 21869745 (+)
LOC118942910 NA coding downstream 253843 21850946 ~ 21855948 (+)
LOC110499998 LOC106576327 coding downstream 323414 21920517 ~ 21948205 (+)
LOC100653451 LOC106609409 coding downstream 394115 21991218 ~ 22007807 (+)
LOC110500917 NA coding downstream 412863 22009966 ~ 22011099 (+)
G1715905 cl031 non-coding upstream 3792 21591688 ~ 21593104 (+)
G1716118 NA non-coding upstream 42381 21554264 ~ 21554515 (+)
G1715907 NA non-coding upstream 43135 21550541 ~ 21553761 (+)
G1715904 NA non-coding upstream 144515 21451120 ~ 21452381 (+)
G1716078 NA non-coding upstream 173042 21420507 ~ 21423854 (+)
G1716154 NA non-coding downstream 48525 21645628 ~ 21645860 (+)
G1716267 NA non-coding downstream 239097 21836200 ~ 21839060 (+)
G1716270 NA non-coding downstream 244178 21841281 ~ 21843712 (+)
G1716881 NA non-coding downstream 275017 21872120 ~ 21872339 (+)
LOC110499980 LOC106576426 other upstream 596759 20954576 ~ 21004439 (+)
G1715392 NA other upstream 1038145 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 1483005 20109125 ~ 20113891 (+)
G1714090 NA other upstream 1972982 19384972 ~ 19754609 (+)
G1713384 NA other upstream 2859460 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 578860 22175963 ~ 22180897 (+)
G1717516 NA other downstream 1121816 22718919 ~ 22784445 (+)
G1717520 NA other downstream 1223649 22820752 ~ 22879923 (+)
G1717517 NA other downstream 1252789 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 1417703 23014617 ~ 23032420 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G7162 NA non-coding CI01000000 null 11252887 ~ 11253185 (+)