Item | Value |
---|---|
gene id | G1716898 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 21890518 ~ 21890814 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1967072 | True | 297 | lncRNA | 0.45 | 1 | 21890518 | 21890814 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110499997 | LOC106576329 | coding | upstream | 20773 | 21650654 ~ 21869745 (+) |
LOC118942910 | NA | coding | upstream | 34570 | 21850946 ~ 21855948 (+) |
LOC110499995 | hcls1 | coding | upstream | 298845 | 21582932 ~ 21591673 (+) |
LOC110499994 | LOC106609404 | coding | upstream | 307705 | 21558541 ~ 21582813 (+) |
LOC110499992 | orc5 | coding | upstream | 344013 | 21535960 ~ 21546505 (+) |
LOC110499998 | LOC106576327 | coding | downstream | 29703 | 21920517 ~ 21948205 (+) |
LOC100653451 | LOC106609409 | coding | downstream | 100404 | 21991218 ~ 22007807 (+) |
LOC110500917 | NA | coding | downstream | 119152 | 22009966 ~ 22011099 (+) |
LOC110501027 | LOC106609383 | coding | downstream | 227167 | 22117981 ~ 22119671 (+) |
LOC110500003 | LOC106609411 | coding | downstream | 250878 | 22141692 ~ 22175639 (+) |
G1716888 | NA | non-coding | upstream | 10286 | 21879990 ~ 21880232 (+) |
G1716885 | NA | non-coding | upstream | 12349 | 21877874 ~ 21878169 (+) |
G1716883 | NA | non-coding | upstream | 13893 | 21876304 ~ 21876625 (+) |
G1716881 | NA | non-coding | upstream | 18179 | 21872120 ~ 21872339 (+) |
G1716905 | NA | non-coding | downstream | 5064 | 21895878 ~ 21896108 (+) |
G1716935 | rps16 | non-coding | downstream | 95446 | 21986260 ~ 21990776 (+) |
G1716998 | NA | non-coding | downstream | 128513 | 22019327 ~ 22019604 (+) |
G1717004 | NA | non-coding | downstream | 144683 | 22035497 ~ 22036125 (+) |
G1717010 | NA | non-coding | downstream | 158421 | 22049235 ~ 22049439 (+) |
LOC110499980 | LOC106576426 | other | upstream | 890381 | 20954576 ~ 21004439 (+) |
G1715392 | NA | other | upstream | 1331767 | 20558422 ~ 20558751 (+) |
nmes1 | nmes1 | other | upstream | 1776627 | 20109125 ~ 20113891 (+) |
G1714090 | NA | other | upstream | 2266604 | 19384972 ~ 19754609 (+) |
G1713384 | NA | other | upstream | 3153082 | 18734791 ~ 18737436 (+) |
G1717161 | LOC106576319 | other | downstream | 285149 | 22175963 ~ 22180897 (+) |
G1717516 | NA | other | downstream | 828105 | 22718919 ~ 22784445 (+) |
G1717520 | NA | other | downstream | 929938 | 22820752 ~ 22879923 (+) |
G1717517 | NA | other | downstream | 959078 | 22849892 ~ 22851407 (+) |
LOC110500038 | LOC106609436 | other | downstream | 1123992 | 23014617 ~ 23032420 (+) |