G1716905


Basic Information

Item Value
gene id G1716905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 21895878 ~ 21896108 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1967079
agacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaataggaaaaaatgtcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtaacttaagggggctgaataattttgcacgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1967079 True 231 lncRNA 0.45 1 21895878 21896108

Neighbor

gene id symbol gene type direction distance location
LOC110499997 LOC106576329 coding upstream 26133 21650654 ~ 21869745 (+)
LOC118942910 NA coding upstream 39930 21850946 ~ 21855948 (+)
LOC110499995 hcls1 coding upstream 304205 21582932 ~ 21591673 (+)
LOC110499994 LOC106609404 coding upstream 313065 21558541 ~ 21582813 (+)
LOC110499992 orc5 coding upstream 349373 21535960 ~ 21546505 (+)
LOC110499998 LOC106576327 coding downstream 24409 21920517 ~ 21948205 (+)
LOC100653451 LOC106609409 coding downstream 95110 21991218 ~ 22007807 (+)
LOC110500917 NA coding downstream 113858 22009966 ~ 22011099 (+)
LOC110501027 LOC106609383 coding downstream 221873 22117981 ~ 22119671 (+)
LOC110500003 LOC106609411 coding downstream 245584 22141692 ~ 22175639 (+)
G1716898 NA non-coding upstream 5064 21890518 ~ 21890814 (+)
G1716888 NA non-coding upstream 15646 21879990 ~ 21880232 (+)
G1716885 NA non-coding upstream 17709 21877874 ~ 21878169 (+)
G1716883 NA non-coding upstream 19253 21876304 ~ 21876625 (+)
G1716881 NA non-coding upstream 23539 21872120 ~ 21872339 (+)
G1716935 rps16 non-coding downstream 90152 21986260 ~ 21990776 (+)
G1716998 NA non-coding downstream 123219 22019327 ~ 22019604 (+)
G1717004 NA non-coding downstream 139389 22035497 ~ 22036125 (+)
G1717010 NA non-coding downstream 153127 22049235 ~ 22049439 (+)
G1717013 LOC106576321 non-coding downstream 157355 22053463 ~ 22054023 (+)
LOC110499980 LOC106576426 other upstream 895741 20954576 ~ 21004439 (+)
G1715392 NA other upstream 1337127 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 1781987 20109125 ~ 20113891 (+)
G1714090 NA other upstream 2271964 19384972 ~ 19754609 (+)
G1713384 NA other upstream 3158442 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 279855 22175963 ~ 22180897 (+)
G1717516 NA other downstream 822811 22718919 ~ 22784445 (+)
G1717520 NA other downstream 924644 22820752 ~ 22879923 (+)
G1717517 NA other downstream 953784 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 1118698 23014617 ~ 23032420 (+)

Expression


Co-expression Network