G1716998


Basic Information

Item Value
gene id G1716998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 22019327 ~ 22019604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1967187
ttgatacatcatccaaagtgtaatgaataacttcaccatgctcaaaaggatattcaatgtctgctttttttaatgTTGATCTATCTACGAATAGATCCCCTTCTCtgtgagacattggaaaacctccctggtctttgtggttgaatctttgtttgaaattcactgctcgactgagggaccttacagataattttgagtccatacaacttattatgtgacttaagtacatttttcctcccGAACCTaattagacttgccataacaaaggagtttaATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1967187 True 278 lncRNA 0.36 1 22019327 22019604

Neighbor

gene id symbol gene type direction distance location
LOC110500917 NA coding upstream 8228 22009966 ~ 22011099 (+)
LOC100653451 LOC106609409 coding upstream 11520 21991218 ~ 22007807 (+)
LOC110499998 LOC106576327 coding upstream 71122 21920517 ~ 21948205 (+)
LOC110499997 LOC106576329 coding upstream 149582 21650654 ~ 21869745 (+)
LOC118942910 NA coding upstream 163379 21850946 ~ 21855948 (+)
LOC110501027 LOC106609383 coding downstream 98377 22117981 ~ 22119671 (+)
LOC110500003 LOC106609411 coding downstream 122088 22141692 ~ 22175639 (+)
LOC118943003 NA coding downstream 307123 22326727 ~ 22337006 (+)
LOC110500014 LOC106576341 coding downstream 694522 22713864 ~ 22716877 (+)
LOC110500032 NA coding downstream 709587 22729191 ~ 22730990 (+)
G1716935 rps16 non-coding upstream 28551 21986260 ~ 21990776 (+)
G1716905 NA non-coding upstream 123219 21895878 ~ 21896108 (+)
G1716898 NA non-coding upstream 128513 21890518 ~ 21890814 (+)
G1716888 NA non-coding upstream 139095 21879990 ~ 21880232 (+)
G1716885 NA non-coding upstream 141158 21877874 ~ 21878169 (+)
G1717004 NA non-coding downstream 15893 22035497 ~ 22036125 (+)
G1717010 NA non-coding downstream 29631 22049235 ~ 22049439 (+)
G1717013 LOC106576321 non-coding downstream 33859 22053463 ~ 22054023 (+)
G1717015 NA non-coding downstream 35689 22055293 ~ 22055546 (+)
G1717018 NA non-coding downstream 38111 22057715 ~ 22057928 (+)
LOC110499980 LOC106576426 other upstream 1019190 20954576 ~ 21004439 (+)
G1715392 NA other upstream 1460576 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 1905436 20109125 ~ 20113891 (+)
G1714090 NA other upstream 2395413 19384972 ~ 19754609 (+)
G1713384 NA other upstream 3281891 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 156359 22175963 ~ 22180897 (+)
G1717516 NA other downstream 699315 22718919 ~ 22784445 (+)
G1717520 NA other downstream 801148 22820752 ~ 22879923 (+)
G1717517 NA other downstream 830288 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 995202 23014617 ~ 23032420 (+)

Expression


Co-expression Network