G1717199


Basic Information

Item Value
gene id G1717199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 22126312 ~ 22126643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1967401
acagtacactagactcgacccttgttctgaacagccctacttcttcatttctcaaaggaaaaacatcaaccaatttctaaagactcttgacatccagtggaagcaataggaactgcaagcaagtgccttagaaatctagatccccatagaaaacccattgaaaagagagtgacctcaaaaataaaattcctggatggtttgtcctctgggtttcgcctgccaaataggttctgttatactcacagacatcattcaaacagttttagaaacttcagagtgtttcctatccaaatctactaacaCTATGTAGATTCAtaacatatcctagcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1967401 True 332 lncRNA 0.39 1 22126312 22126643

Neighbor

gene id symbol gene type direction distance location
LOC110501027 LOC106609383 coding upstream 6641 22117981 ~ 22119671 (+)
LOC110500917 NA coding upstream 115213 22009966 ~ 22011099 (+)
LOC100653451 LOC106609409 coding upstream 118505 21991218 ~ 22007807 (+)
LOC110499998 LOC106576327 coding upstream 178107 21920517 ~ 21948205 (+)
LOC118942910 NA coding upstream 270364 21850946 ~ 21855948 (+)
LOC110500003 LOC106609411 coding downstream 15049 22141692 ~ 22175639 (+)
LOC118943003 NA coding downstream 200084 22326727 ~ 22337006 (+)
LOC110500014 LOC106576341 coding downstream 587483 22713864 ~ 22716877 (+)
LOC110500032 NA coding downstream 602548 22729191 ~ 22730990 (+)
LOC110500034 LOC106609434 coding downstream 768115 22894758 ~ 22914536 (+)
G1717195 NA non-coding upstream 4229 22121655 ~ 22122083 (+)
G1717194 NA non-coding upstream 5251 22120850 ~ 22121061 (+)
G1717025 NA non-coding upstream 62412 22063403 ~ 22063900 (+)
G1717020 NA non-coding upstream 66075 22060038 ~ 22060237 (+)
G1717018 NA non-coding upstream 68384 22057715 ~ 22057928 (+)
G1717204 NA non-coding downstream 9022 22135665 ~ 22135929 (+)
G1717212 NA non-coding downstream 57774 22184417 ~ 22184659 (+)
G1717218 NA non-coding downstream 63797 22190440 ~ 22190541 (+)
G1717217 NA non-coding downstream 64157 22190800 ~ 22191215 (+)
G1717246 NA non-coding downstream 110218 22236861 ~ 22270892 (+)
LOC110499980 LOC106576426 other upstream 1126175 20954576 ~ 21004439 (+)
G1715392 NA other upstream 1567561 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 2012421 20109125 ~ 20113891 (+)
G1714090 NA other upstream 2502398 19384972 ~ 19754609 (+)
G1713384 NA other upstream 3388876 18734791 ~ 18737436 (+)
G1717161 LOC106576319 other downstream 49320 22175963 ~ 22180897 (+)
G1717516 NA other downstream 592276 22718919 ~ 22784445 (+)
G1717520 NA other downstream 694109 22820752 ~ 22879923 (+)
G1717517 NA other downstream 723249 22849892 ~ 22851407 (+)
LOC110500038 LOC106609436 other downstream 888163 23014617 ~ 23032420 (+)

Expression


Co-expression Network