Gene
RNA
| Item | Value |
|---|---|
| gene id | G1717217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 22190800 ~ 22191215 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1967419 | True | 416 | lncRNA | 0.40 | 1 | 22190800 | 22191215 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500003 | LOC106609411 | coding | upstream | 15161 | 22141692 ~ 22175639 (+) |
| LOC110501027 | LOC106609383 | coding | upstream | 71129 | 22117981 ~ 22119671 (+) |
| LOC110500917 | NA | coding | upstream | 179701 | 22009966 ~ 22011099 (+) |
| LOC100653451 | LOC106609409 | coding | upstream | 182993 | 21991218 ~ 22007807 (+) |
| LOC110499998 | LOC106576327 | coding | upstream | 242595 | 21920517 ~ 21948205 (+) |
| LOC118943003 | NA | coding | downstream | 135512 | 22326727 ~ 22337006 (+) |
| LOC110500014 | LOC106576341 | coding | downstream | 522911 | 22713864 ~ 22716877 (+) |
| LOC110500032 | NA | coding | downstream | 537976 | 22729191 ~ 22730990 (+) |
| LOC110500034 | LOC106609434 | coding | downstream | 703543 | 22894758 ~ 22914536 (+) |
| LOC110501029 | LOC106609386 | coding | downstream | 723616 | 22914831 ~ 22920359 (+) |
| G1717218 | NA | non-coding | upstream | 259 | 22190440 ~ 22190541 (+) |
| G1717212 | NA | non-coding | upstream | 6141 | 22184417 ~ 22184659 (+) |
| G1717204 | NA | non-coding | upstream | 54871 | 22135665 ~ 22135929 (+) |
| G1717199 | NA | non-coding | upstream | 64157 | 22126312 ~ 22126643 (+) |
| G1717195 | NA | non-coding | upstream | 68717 | 22121655 ~ 22122083 (+) |
| G1717246 | NA | non-coding | downstream | 45646 | 22236861 ~ 22270892 (+) |
| G1717364 | NA | non-coding | downstream | 230916 | 22422131 ~ 22422412 (+) |
| G1717500 | NA | non-coding | downstream | 472527 | 22663742 ~ 22663958 (+) |
| G1717514 | NA | non-coding | downstream | 522330 | 22713545 ~ 22713768 (+) |
| G1717161 | LOC106576319 | other | upstream | 9903 | 22175963 ~ 22180897 (+) |
| LOC110499980 | LOC106576426 | other | upstream | 1190663 | 20954576 ~ 21004439 (+) |
| G1715392 | NA | other | upstream | 1632049 | 20558422 ~ 20558751 (+) |
| nmes1 | nmes1 | other | upstream | 2076909 | 20109125 ~ 20113891 (+) |
| G1714090 | NA | other | upstream | 2566886 | 19384972 ~ 19754609 (+) |
| G1717516 | NA | other | downstream | 527704 | 22718919 ~ 22784445 (+) |
| G1717520 | NA | other | downstream | 629537 | 22820752 ~ 22879923 (+) |
| G1717517 | NA | other | downstream | 658677 | 22849892 ~ 22851407 (+) |
| LOC110500038 | LOC106609436 | other | downstream | 823591 | 23014617 ~ 23032420 (+) |
| ruxf | LOC105021811 | other | downstream | 907800 | 23098972 ~ 23100823 (+) |
