G1717364


Basic Information

Item Value
gene id G1717364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 22422131 ~ 22422412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1967567
TAATAAGGTAATTTACATGAATACAGGCACATGACTATATCTATTAGATTTTACAATGCACATCAACATAACTGATGTGTGAATTCAACTAGATATCAAGCTTCCCCTTGTCTAATTCATTCACAAAAGGCAATGAACATTTTCGTATGCAAGCCCCATTACATCCAGTAATTGCCCAATGTCCAATTTCCTCAAAAGACACCCGTTCGAGAATCACGATTTACAACACTGATTCCCAAATTCCAAAgcttctctctgtaggtgagtCACCAAGCTCCCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1967567 True 282 lncRNA 0.38 1 22422131 22422412

Neighbor

gene id symbol gene type direction distance location
LOC118943003 NA coding upstream 85125 22326727 ~ 22337006 (+)
LOC110500003 LOC106609411 coding upstream 246492 22141692 ~ 22175639 (+)
LOC110501027 LOC106609383 coding upstream 302460 22117981 ~ 22119671 (+)
LOC110500917 NA coding upstream 411032 22009966 ~ 22011099 (+)
LOC100653451 LOC106609409 coding upstream 414324 21991218 ~ 22007807 (+)
LOC110500014 LOC106576341 coding downstream 291714 22713864 ~ 22716877 (+)
LOC110500032 NA coding downstream 306779 22729191 ~ 22730990 (+)
LOC110500034 LOC106609434 coding downstream 472346 22894758 ~ 22914536 (+)
LOC110501029 LOC106609386 coding downstream 492419 22914831 ~ 22920359 (+)
LOC110500038 LOC106609436 coding downstream 592205 23014617 ~ 23032420 (+)
G1717246 NA non-coding upstream 151239 22236861 ~ 22270892 (+)
G1717217 NA non-coding upstream 230916 22190800 ~ 22191215 (+)
G1717218 NA non-coding upstream 231590 22190440 ~ 22190541 (+)
G1717212 NA non-coding upstream 237472 22184417 ~ 22184659 (+)
G1717204 NA non-coding upstream 286202 22135665 ~ 22135929 (+)
G1717500 NA non-coding downstream 241330 22663742 ~ 22663958 (+)
G1717514 NA non-coding downstream 291133 22713545 ~ 22713768 (+)
G1717538 NA non-coding downstream 315359 22737771 ~ 22743135 (+)
G1717523 NA non-coding downstream 380719 22803131 ~ 22834858 (+)
G1717161 LOC106576319 other upstream 241234 22175963 ~ 22180897 (+)
LOC110499980 LOC106576426 other upstream 1421994 20954576 ~ 21004439 (+)
G1715392 NA other upstream 1863380 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 2308240 20109125 ~ 20113891 (+)
G1714090 NA other upstream 2798217 19384972 ~ 19754609 (+)
G1717516 NA other downstream 296507 22718919 ~ 22784445 (+)
G1717520 NA other downstream 398340 22820752 ~ 22879923 (+)
G1717517 NA other downstream 427480 22849892 ~ 22851407 (+)
ruxf LOC105021811 other downstream 676603 23098972 ~ 23100823 (+)

Expression


Co-expression Network