G1717516


Basic Information

Item Value
gene id G1717516
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 22718919 ~ 22784445 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1967725
TCTAAACTAAAGCTGGTAGGATTCCTCTGGTAGTGTTGTCTGTCCTCTGTGACTTTACCACCACTGTTAAATGTGAGATCAGCATGTTTAATAAAGGAATATACAACATGGATCACtatcactactgctgctgctgttgtctttCATATGGACAATATGGAGGAATACTAGCAACACTGATCTAATGCTGGACTGTACCTCCAGACTAGGAGAACCTGATACACAGAGGAAGGAAAAATACTACTATCTGGATTTAAGATACAATTCATATTTGTATTATCTAGAAACAGCTAATATGAAGTGTTTGTTCTACCTGGAAGATGTTAAAGTGTATTAGTGTTGATTATGATTCTGTATGAGTGATCTTCACTGTAACAGCTGCAGCATCACAAGTAACAGTGCCCCCACCCTCACCGTCCTGCCCCCCTCTAGTGAGGAGCTGTCCAGTACAACAACAGCCACACTGATGTGTCTGGCAAACAAGGGCTTCCCCTCAGACTGGACCATTAGATGGAAAGTGGACGGGACCAGCCAGAAGCAGGAGGCCAGTCCCAGGGTTCTGGAGAAGGATGGTCTGTACAGCTGGAGCAGCACCCTGACTCTCACTGTCCAGGAGTGGACCAAGGCAGGAGAGGTGACCTGTGAAGCCCAACAGATATCCCAGACTCCGGTCACCAAGACCCTGAGGAAGTCTGACTGTTCTGGGTAGGACCCCTCAGTCACACACCCCTGTGGAGCAAGGCTGCTGGTTCCTCTGCTTTGACTCTGTTCTGAGATCAGATGTTCTCTGTCTTATTGTTCACTGACATGTAGACTAACAGAGGGCTTTGCTTGAGTCATTGTGTCAATCCTCTCTGTAGACTGAGATTGTATCAGTGTTAGATTTGATGTGTTCTGTTTTATTACTTTTAGATACTGTAGGAATGATTGCTTTGATGCTTTGATTAATAGACGAAAATAAAGACTTCTCGTTGGAACAa
>TU1967724
GATCAGATTCCTCTGGTAGTGGTGTCTCTTCTCTGTGACTTTACAACCGGAGATATATCTGAGATAAACAGGGAATATACACAACATGAATCAATATTACTGCTGTTACTTTTTCTCCTGGACAAAATAGAGGAACACAAATGCTGGATTTAATGTTGAACACTGACTGTTCTGTTCCTAAGAGGAAATCTGATGCACAGAAGAAAGACCAATGACAAATATCTAGATTTGAgatacaatttatattttttaagAATTGTATAAACAGCCCATGTGAAGTGTTTATTTTACCTCGAAAGATGTTAAAtggtatttgtgtttagtgtgatTCTGTATGAGGGATTTTCACTGTTACAgctgaagcatcacagcacagagAGGTTTTTGTACCAGCAGTAATAGGGATTGTATCACTGTGGTGGACTTTTGGTAGCGGCACCAGACTAGATGTTGGAAGTAACAGTTCCCCCACCCTCACCGTCCTGCCCCCCTCTAGTGAGGAGCTGTCCAGTACAACAACAGCCACACTGATGTGTCTGGCCAACAAGGGCTTCCCCTCAGACTGGACCATAAGATGGAAAGTGGACGGCAACAGCAAGAATCAGGAGGCCAGCCCCAGGGTCCAGGAGAAGGACGGTCTGTATAGCTGGAGCAGCACCCTGACCCTCACTTACCAGGAGTGGACCAAGGCAGGAGAGGTTACCTGTGAAGCCCAGCAGATATCCCAGACTCCGGTCACCAAGACCCTGAAGAGGGCTGACTGTTCTGGGTAGAACCCCTCAGTCACACACCCCTGTGGAGAGAGGACGCTGGTTCCTCGGCTTTGACTTGCTTTGTTCTAAGATCAGTCGTTCTCTGATTTAGTGATCACTCtcgtgtagactaacagggagcTTGGCTTGAGTTTATGTGTCAATCCATTCTGTAGAATGAGATTTTGTTCGTTTTAGATTTGATGTGATCTGCTTTTATTCACTATCATGTTCGCTTTGATTCTTCGATTATGTAATATTGGATTAAAATAAAGTTTTCTTTTTGGAATGCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1967725 False 980 TUCP 0.45 2 22718919 22721074
TU1967724 True 1045 TUCP 0.44 2 22782485 22784445

Neighbor

gene id symbol gene type direction distance location
LOC110500014 LOC106576341 coding upstream 2042 22713864 ~ 22716877 (+)
LOC118943003 NA coding upstream 381913 22326727 ~ 22337006 (+)
LOC110500003 LOC106609411 coding upstream 543280 22141692 ~ 22175639 (+)
LOC110501027 LOC106609383 coding upstream 599248 22117981 ~ 22119671 (+)
LOC110500917 NA coding upstream 707820 22009966 ~ 22011099 (+)
LOC110500034 LOC106609434 coding downstream 110313 22894758 ~ 22914536 (+)
LOC110501029 LOC106609386 coding downstream 130386 22914831 ~ 22920359 (+)
LOC110500038 LOC106609436 coding downstream 230172 23014617 ~ 23032420 (+)
LOC110500039 LOC100194705 coding downstream 249280 23033725 ~ 23040825 (+)
ruxf LOC105021811 coding downstream 314527 23098972 ~ 23100823 (+)
G1717514 NA non-coding upstream 5151 22713545 ~ 22713768 (+)
G1717500 NA non-coding upstream 54961 22663742 ~ 22663958 (+)
G1717364 NA non-coding upstream 296507 22422131 ~ 22422412 (+)
G1717246 NA non-coding upstream 448027 22236861 ~ 22270892 (+)
G1717523 NA non-coding downstream 18686 22803131 ~ 22834858 (+)
G1717522 NA non-coding downstream 18980 22803425 ~ 22848933 (+)
G1717526 NA non-coding downstream 81386 22865831 ~ 22873187 (+)
G1717524 NA non-coding downstream 94064 22878509 ~ 22881503 (+)
G1717642 NA non-coding downstream 173230 22957675 ~ 22962698 (+)
G1717161 LOC106576319 other upstream 538022 22175963 ~ 22180897 (+)
LOC110499980 LOC106576426 other upstream 1718782 20954576 ~ 21004439 (+)
G1715392 NA other upstream 2160168 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 2605028 20109125 ~ 20113891 (+)
G1714090 NA other upstream 3095005 19384972 ~ 19754609 (+)
G1717520 NA other downstream 36307 22820752 ~ 22879923 (+)
G1717517 NA other downstream 65447 22849892 ~ 22851407 (+)
G1717785 NA other downstream 471681 23256126 ~ 23256812 (+)

Expression


Co-expression Network