G1718249


Basic Information

Item Value
gene id G1718249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 22748096 ~ 22753596 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1968569
cataccatcacCCCAcggccaccatggggcactccaTTAccaaagttgacatcagcaaactgctcgcccacacaatgccatacacgtggtctgcggttgtgaggctggttggacgtactgccaaattctctgaaacgacgttgaacattacattctctggcaacagctctggtggacattcctgcagtcagcatgccagttgcacgctccctcacaacttgatacatctgtggcattgtattgtgtgacaaactACACAttgtagagtggccttttattttccccagcacaaggtgcacctgtataataatcatgctgtttagttatcttcttgatatgccacacctgtcaggtggatggattatcttggtacaggagaaatgctcactaacagggatgtaaatacatttgtgcacaaaatttaagAGACATTAGCTAGTTGTGCATAattatggacaatttctgggatcttttatttcagctcatgaaacatgggacccacactttacatgttgcatttatatttttgttcagtgtacgtaCATAAGTAACCCCACGGAAGTCAAAATATTAAATCATCACATTTTAAATCAACATTACAAACATTTCAGCCCACTAAAATTCCTCAAATGGTGTGATAAAAATTAATCTGATCATTTAGAATTATTAATTGTTATGAGCAGTTTACAGACTGCCGGATCTGTCAATCAGGAACAAGATGTGGGGCTCAGACATTAGAAAAAAGTCATCCTAATTGCAATCGTTCTGTCTTAATCCAATGATTGCGCCACATAATTTTTACACTGATGCCCCAGGTGTCCTAAAATAGTGTGATAACATGCGtcttggtgagaggtgtaggagtcaggcgcaggagagcagggatgtctgaggagcgtgtttaataatagtccagcaatgcaaatggcacagaacaaaaatcccaaaactacgctctcgaataatcgtgcaaacacacggaggaactaacacagttccgacactt

Function

NR:

description
hypothetical protein EH28_23780

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1968569 True 1006 lncRNA 0.42 2 22748096 22753596
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110500020 NA coding downstream 19171 22728126 ~ 22728925 (-)
LOC110500012 LOC106576307 coding downstream 35268 22689392 ~ 22712828 (-)
LOC110500010 LOC106609419 coding downstream 90204 22595248 ~ 22657892 (-)
LOC110500009 LOC106609418 coding downstream 183067 22549983 ~ 22565029 (-)
LOC110500007 LOC106609416 coding downstream 214193 22453763 ~ 22533903 (-)
zgc:113263 LOC106609430 coding upstream 130665 22884261 ~ 22894155 (-)
LOC110500035 LOC106609443 coding upstream 176165 22929761 ~ 22973628 (-)
LOC110500036 nduac coding upstream 226539 22980135 ~ 22981529 (-)
LOC110500037 LOC106609431 coding upstream 230040 22983636 ~ 23014604 (-)
LOC110500040 LOC106576294 coding upstream 287702 23041298 ~ 23053672 (-)
G1718239 NA non-coding downstream 32098 22715773 ~ 22715998 (-)
G1718104 NA non-coding downstream 312402 22435459 ~ 22435694 (-)
G1717969 NA non-coding downstream 565142 22182610 ~ 22182954 (-)
G1717932 NA non-coding downstream 612160 22135703 ~ 22135936 (-)
G1718194 NA non-coding upstream 36837 22790433 ~ 22790949 (-)
G1718275 NA non-coding upstream 75040 22828636 ~ 22922405 (-)
G1718189 NA non-coding upstream 120234 22873830 ~ 22879852 (-)
G1718300 NA non-coding upstream 144722 22898318 ~ 22905475 (-)
G1718352 NA non-coding upstream 216783 22970379 ~ 22970583 (-)
G1718174 NA other downstream 11431 22734837 ~ 22736665 (-)
LOC110500001 rps16 other downstream 757291 21986217 ~ 21990859 (-)
G1717061 LOC106576327 other downstream 803836 21939894 ~ 21944260 (-)
G1716873 NA other downstream 884649 21857439 ~ 21863447 (-)
G1716815 NA other downstream 982886 21764539 ~ 21765210 (-)
G1718263 NA other upstream 33881 22787477 ~ 22815891 (-)
G1718273 NA other upstream 64714 22818310 ~ 22820330 (-)
G1718277 NA other upstream 79025 22832621 ~ 22851447 (-)
G1718181 NA other upstream 128900 22882496 ~ 22965877 (-)

Expression

G1718249 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G1718249 Expression in each Bioproject

Bar chart with 19 bars.
G1718249 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network