G1717520


Basic Information

Item Value
gene id G1717520
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 22820752 ~ 22879923 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1967730
ATGAtaatagtgtgtagtgtatgtctCTACATAAATGTGTCATGTTTGAGCCCAGCATCATGTCTCATTCACAGATCTAACAGCTCATGAAAAGAGTTAATACATGCTAGATGATCACATCAATAACTGGTTGTGAAGTGCATGTAGGGAATTGGTTTGGGGGGCTGACACTTTTCCTCTTACTTCTGTACATCTTACTCTACTATGGACTGGTATTGTCTTCCAAAACTACAAATAACTTTTATATACACTTTCAGTTCATGTCCAAAATAACAAGTTACAACCATGATGAGGATAataatgacgatgatgatgacgatgataaaGACGATGTTGGAGAACGTATGATTCTTTCTGTTTTCAAAGTTGACCTCTTCTACTGATCAGTGTTCCATGTCACTGTCTCTTCCCCCTTATCACCTGCAGTAGGTCCCAGCTGTATCAGTACAGtcactgtgcagtctgactgagggaggtttTTGTACGGCTCTGTATCACTGTGTGAACACCCAGACACTGTTGGGGTAGTGACCACTCTGACAAtagtaatctcctgcatcttcagcctggactccactgatggtcagagtgaagtcactcccagatccactgcCACTGAATCTAGATGGAGTCCCAGAGTTACGGGTACTAATGAAATATGTAAGGAGTTTAGGAGATTCTCCGAGTTTCTGTTGATACCAGGCCAACCTCTGTCCATGTGTATCACTGTATACTGCACTGCTGGTCTTACAGCTGAAACTGACTGAGTGACCCATTGAAACAGCGTTCACTGCAGGAGTCTGGGTCACTGTGACCTGGCCTCTGGACTCTTGAAAGCAGAGGGCAAATATCCAGATGAAGATGGTGATAAAAGTCATGGTTGTTTTGGGTTCTGTTGTCATGAAGGACAGCTCTCAGTCATGAAGTGTTAAACTCACAGGGTTATAAATACTCCCAGAGCACTGAAGCATGTGCTGCCAATGCAAACTGTCATATGTAAATAGTCTTACTGCTAGTACCTACATTCATAACTGTTAGCTATATAACTACATACAGATTATGCAGATACAGAATATTTTATCGTGTTATAAATAATTTATACTGTAAATCAGTGATCTAAGAGGAACATGTAATTATCTAAGTGTGTCAGTGGATTATACTCATAACCCAGGATTATCAGTCCCTAATACATTATTCCAGTACTTCAGTACTATCAGtccctattgtattatattagtagttcaGTACTCTCTGTCCCTATTGTGTTATATTTGTACTTCAGTACTATCAGTCCCTATtgtacagacagaagttgacaactgGAACATAAAGCATGTTTCCGAGTAAGTTCTGTATCAAAGAAATGGTCCCAAGTTATTTTATTAAACCCAAAGTCCAGCCCGAGTGATGTCACTGCCTACATCATTATCTTTTACTCATGAGACCAAAACCATGCCTACTCAACACTAAAACTCTTGTTTATATAGCTATCTAAAAGCTTAGCAGTAAATGTCCAAGTTGATGTATAGTGGAACGTCTAACTAATCTCTTCTCTtacactcccctgcagagttctgtcttcacAGTCACACATTTCTCAGAG

Function

NR:

description
immunoglobulin light chain precursor, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1967730 True 1603 TUCP 0.40 4 22820752 22879923

Neighbor

gene id symbol gene type direction distance location
LOC110500032 NA coding upstream 89762 22729191 ~ 22730990 (+)
LOC110500014 LOC106576341 coding upstream 103875 22713864 ~ 22716877 (+)
LOC118943003 NA coding upstream 483746 22326727 ~ 22337006 (+)
LOC110500003 LOC106609411 coding upstream 645113 22141692 ~ 22175639 (+)
LOC110501027 LOC106609383 coding upstream 701081 22117981 ~ 22119671 (+)
LOC110500034 LOC106609434 coding downstream 14835 22894758 ~ 22914536 (+)
LOC110501029 LOC106609386 coding downstream 34908 22914831 ~ 22920359 (+)
LOC110500038 LOC106609436 coding downstream 134694 23014617 ~ 23032420 (+)
LOC110500039 LOC100194705 coding downstream 153802 23033725 ~ 23040825 (+)
ruxf LOC105021811 coding downstream 219049 23098972 ~ 23100823 (+)
G1717538 NA non-coding upstream 77617 22737771 ~ 22743135 (+)
G1717514 NA non-coding upstream 106984 22713545 ~ 22713768 (+)
G1717500 NA non-coding upstream 156794 22663742 ~ 22663958 (+)
G1717364 NA non-coding upstream 398340 22422131 ~ 22422412 (+)
G1717642 NA non-coding downstream 77752 22957675 ~ 22962698 (+)
G1717649 NA non-coding downstream 93886 22973809 ~ 22974014 (+)
G1717650 NA non-coding downstream 94157 22974080 ~ 22974317 (+)
G1717653 NA non-coding downstream 99577 22979500 ~ 22979595 (+)
G1717652 nduac non-coding downstream 100221 22980144 ~ 22981466 (+)
G1717516 NA other upstream 36307 22718919 ~ 22784445 (+)
G1717161 LOC106576319 other upstream 639855 22175963 ~ 22180897 (+)
LOC110499980 LOC106576426 other upstream 1820615 20954576 ~ 21004439 (+)
G1715392 NA other upstream 2262001 20558422 ~ 20558751 (+)
nmes1 nmes1 other upstream 2706861 20109125 ~ 20113891 (+)
G1717785 NA other downstream 376203 23256126 ~ 23256812 (+)
G1719225 NA other downstream 1193482 24073405 ~ 24074448 (+)
G1719268 NA other downstream 1255841 24135764 ~ 24136323 (+)

Expression


Co-expression Network