G1717526


Basic Information

Item Value
gene id G1717526
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 22865831 ~ 22873187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1967736
CTCTACTATGGACTGGTATTGTCTTCCAAAACTACAAATAACTTTTACTGTGTATACACTTTCAGTTCATGTCCAATATAACAAGTTACAAccatgatgacgatgatgacgtTGGGAGAACGTGTGATTTGTATGATACTTTCTAACCATTTTCAAAGTTTACCCCCTCTACTGATCAGTCTTCCATGTCACTTCCCCCTCAGCACCTGCAGTAGGTCCCAGCTGTATCAGTACAGTCACTgaacagtctgactgagggaggtaTTTGTACGGCTCTGTATCACTGTGTGAACACTGGACCACTGTGGAAACTctgacagtagtaatctcctgTATCTTCAGTctggactccactgatggtcagagtgaagtcactcccagatccactgcCACTGAATCTAGATGGAGTCCCAGAGTTACGGGTACTAATGAAATATGTAAGGAGTTTAGGAGATTCTCCGAGTTTCTGTTGATACCAGGCCAACCTCTGTCCATGTGTATCACTGTATACTGCACTGCTGGTCTTACAGCTGAGACTGACTGAGTGACCCATTGAAACAGCGTTCACTGCAGGAGTCTGGGTCACTGTGACCTGGCCTCTTGACTCTGAAACAGAAATGTAATTAACATTCAATCGCCCATTAATTTGCTCATTGCTTTACAAAAGAATGACTTTACAATAACATAATGGTATTTACTTTAATAAGGTTAAGTACCTACAGTCAGGGTaaatgtatgtaaaatatattaCCTTGAAAGCAGAGGGCAAATATCCAGATGAAGATGGTGATAAAAGTCATGGTTGTTTTGGGTTCTGTTGTCATGAAGGACAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1967736 True 833 lncRNA 0.42 2 22865831 22873187

Neighbor

gene id symbol gene type direction distance location
LOC110500032 NA coding upstream 134841 22729191 ~ 22730990 (+)
LOC110500014 LOC106576341 coding upstream 148954 22713864 ~ 22716877 (+)
LOC118943003 NA coding upstream 528825 22326727 ~ 22337006 (+)
LOC110500003 LOC106609411 coding upstream 690192 22141692 ~ 22175639 (+)
LOC110501027 LOC106609383 coding upstream 746160 22117981 ~ 22119671 (+)
LOC110500034 LOC106609434 coding downstream 21571 22894758 ~ 22914536 (+)
LOC110501029 LOC106609386 coding downstream 41644 22914831 ~ 22920359 (+)
LOC110500038 LOC106609436 coding downstream 141430 23014617 ~ 23032420 (+)
LOC110500039 LOC100194705 coding downstream 160538 23033725 ~ 23040825 (+)
ruxf LOC105021811 coding downstream 225785 23098972 ~ 23100823 (+)
G1717522 NA non-coding upstream 16898 22803425 ~ 22848933 (+)
G1717523 NA non-coding upstream 30973 22803131 ~ 22834858 (+)
G1717538 NA non-coding upstream 122696 22737771 ~ 22743135 (+)
G1717514 NA non-coding upstream 152063 22713545 ~ 22713768 (+)
G1717524 NA non-coding downstream 5322 22878509 ~ 22881503 (+)
G1717642 NA non-coding downstream 84488 22957675 ~ 22962698 (+)
G1717649 NA non-coding downstream 100622 22973809 ~ 22974014 (+)
G1717650 NA non-coding downstream 100893 22974080 ~ 22974317 (+)
G1717653 NA non-coding downstream 106313 22979500 ~ 22979595 (+)
G1717517 NA other upstream 14424 22849892 ~ 22851407 (+)
G1717516 NA other upstream 81386 22718919 ~ 22784445 (+)
G1717161 LOC106576319 other upstream 684934 22175963 ~ 22180897 (+)
LOC110499980 LOC106576426 other upstream 1865694 20954576 ~ 21004439 (+)
G1715392 NA other upstream 2307080 20558422 ~ 20558751 (+)
G1717785 NA other downstream 382939 23256126 ~ 23256812 (+)
G1719225 NA other downstream 1200218 24073405 ~ 24074448 (+)
G1719268 NA other downstream 1262577 24135764 ~ 24136323 (+)

Expression


Co-expression Network