G1718300



Basic Information


Item Value
gene id G1718300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 22898318 ~ 22905475 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1968628
TGGGGCCTGTTGATGGAAGAAGCACCGCCGGCACCTTCACTTTTCATGGCCTGGATGTTCTGgaaacctattgaacttgaacctgatcaaacatctctggtgagacctgaaaatagctgtgcagcgatgctccccatccaacctgacagagcttgagaggatctgcagagaagaatgggagaaacaccccaaatacagaaacgaatggagctatcgtcagaccggctggaatgctgtgttccttacaggacattctgtctctacccagggaggggagagaccttgggcttgtagtagattgtttaccaggtggcagacaatgtgggaaggcttgtgaactatattgccattgtatcggagaaggaggagcagcatacaaaacgctatgatgaaatgtgatgtatataaaccaatgtacattGTATTATGATCAGTACTCCCGAGAATAAACGCTActgattgattttgagactggtctctg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1968628 True 481 lncRNA 0.47 3 22898318 22905475

Neighbor


gene id symbol gene type direction distance location
zgc:113263 LOC106609430 coding downstream 4163 22884261 ~ 22894155 (-)
LOC110500020 NA coding downstream 169393 22728126 ~ 22728925 (-)
LOC110500012 LOC106576307 coding downstream 185490 22689392 ~ 22712828 (-)
LOC110500010 LOC106609419 coding downstream 240426 22595248 ~ 22657892 (-)
LOC110500009 LOC106609418 coding downstream 333289 22549983 ~ 22565029 (-)
LOC110500035 LOC106609443 coding upstream 24286 22929761 ~ 22973628 (-)
LOC110500036 nduac coding upstream 74660 22980135 ~ 22981529 (-)
LOC110500037 LOC106609431 coding upstream 78161 22983636 ~ 23014604 (-)
LOC110500040 LOC106576294 coding upstream 135823 23041298 ~ 23053672 (-)
ntn4 LOC106609442 coding upstream 166540 23072015 ~ 23092611 (-)
G1718189 NA non-coding downstream 18466 22873830 ~ 22879852 (-)
G1718194 NA non-coding downstream 107369 22790433 ~ 22790949 (-)
G1718166 NA non-coding downstream 113873 22718934 ~ 22784445 (-)
G1718249 NA non-coding downstream 144722 22748096 ~ 22753596 (-)
G1718239 NA non-coding downstream 182320 22715773 ~ 22715998 (-)
G1718352 NA non-coding upstream 64904 22970379 ~ 22970583 (-)
G1718354 NA non-coding upstream 70758 22976233 ~ 22976756 (-)
G1718355 NA non-coding upstream 76579 22982054 ~ 22982283 (-)
G1718379 LOC100194705 non-coding upstream 128311 23033786 ~ 23040823 (-)
G1718277 NA other downstream 46871 22832621 ~ 22851447 (-)
G1718273 NA other downstream 77988 22818310 ~ 22820330 (-)
G1718263 NA other downstream 82427 22787477 ~ 22815891 (-)
G1718174 NA other downstream 161653 22734837 ~ 22736665 (-)
LOC110500001 rps16 other downstream 907513 21986217 ~ 21990859 (-)
G1718397 NA other upstream 151906 23057381 ~ 23057819 (-)
igf1 LOC100136517 other upstream 460625 23366099 ~ 23386794 (-)

Expression



Co-expression Network