Gene
RNA
| Item | Value |
|---|---|
| gene id | G1717725 |
| gene name | LOC106609435 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23146757 ~ 23147769 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1967988 | True | 821 | lncRNA | 0.47 | 2 | 23146757 | 23147769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| amdhd1 | amdhd1 | coding | upstream | 41751 | 23100978 ~ 23105006 (+) |
| ruxf | LOC105021811 | coding | upstream | 45934 | 23098972 ~ 23100823 (+) |
| LOC110500039 | LOC100194705 | coding | upstream | 105932 | 23033725 ~ 23040825 (+) |
| LOC110500038 | LOC106609436 | coding | upstream | 114337 | 23014617 ~ 23032420 (+) |
| LOC110501029 | LOC106609386 | coding | upstream | 226398 | 22914831 ~ 22920359 (+) |
| klhl42 | LOC106609448 | coding | downstream | 9314 | 23157083 ~ 23160673 (+) |
| LOC110500046 | LOC106609461 | coding | downstream | 16336 | 23164105 ~ 23189656 (+) |
| ascl1a | LOC106576285 | coding | downstream | 71175 | 23218944 ~ 23220765 (+) |
| LOC110500049 | LOC106576281 | coding | downstream | 148014 | 23295783 ~ 23313876 (+) |
| th2 | LOC106609447 | coding | downstream | 166566 | 23314335 ~ 23327014 (+) |
| G1717720 | NA | non-coding | upstream | 12348 | 23133232 ~ 23134409 (+) |
| G1717689 | NA | non-coding | upstream | 15051 | 23121884 ~ 23131706 (+) |
| G1717688 | NA | non-coding | upstream | 38321 | 23108190 ~ 23108436 (+) |
| G1717655 | NA | non-coding | upstream | 161857 | 22983213 ~ 22984900 (+) |
| G1717652 | nduac | non-coding | upstream | 165291 | 22980144 ~ 22981466 (+) |
| G1717730 | LOC106576289 | non-coding | downstream | 13837 | 23161606 ~ 23162406 (+) |
| G1717680 | NA | non-coding | downstream | 31776 | 23179545 ~ 23184074 (+) |
| G1717749 | NA | non-coding | downstream | 50269 | 23198038 ~ 23209398 (+) |
| G1717748 | NA | non-coding | downstream | 50959 | 23198728 ~ 23199596 (+) |
| G1717520 | NA | other | upstream | 266834 | 22820752 ~ 22879923 (+) |
| G1717517 | NA | other | upstream | 295350 | 22849892 ~ 22851407 (+) |
| G1717516 | NA | other | upstream | 362312 | 22718919 ~ 22784445 (+) |
| G1717785 | NA | other | downstream | 108357 | 23256126 ~ 23256812 (+) |
| G1719225 | NA | other | downstream | 925636 | 24073405 ~ 24074448 (+) |
| G1719268 | NA | other | downstream | 987995 | 24135764 ~ 24136323 (+) |
| adm2a | LOC106609361 | other | downstream | 1130062 | 24277797 ~ 24294858 (+) |
| LOC110500097 | LOC106576231 | other | downstream | 1168869 | 24315919 ~ 24321712 (+) |
