Gene
RNA
| Item | Value |
|---|---|
| gene id | G1718385 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 23159239 ~ 23159905 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| kelch-like protein 42, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1968739 | True | 667 | lncRNA | 0.42 | 1 | 23159239 | 23159905 |
23,157,600
23,158,000
23,158,400
23,158,800
23,159,200
23,159,600
23,160,000
23,160,400
23,160,800
23,161,200
23,161,600
23,162,000
23,162,400
23,162,800
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501030 | LOC106609435 | coding | downstream | 5733 | 23141591 ~ 23153506 (-) |
| LOC110500044 | tsn9 | coding | downstream | 21087 | 23133989 ~ 23138152 (-) |
| LOC118943006 | amdhd1 | coding | downstream | 48637 | 23108483 ~ 23110665 (-) |
| ntn4 | LOC106609442 | coding | downstream | 66628 | 23072015 ~ 23092611 (-) |
| LOC110500040 | LOC106576294 | coding | downstream | 105567 | 23041298 ~ 23053672 (-) |
| LOC110501032 | itfg2 | coding | upstream | 19822 | 23179727 ~ 23212378 (-) |
| LOC118936407 | itfg2 | coding | upstream | 53162 | 23213067 ~ 23215065 (-) |
| trnaa-ugc-147 | NA | coding | upstream | 91854 | 23251759 ~ 23251832 (-) |
| LOC118942912 | NA | coding | upstream | 104580 | 23264485 ~ 23269610 (-) |
| nup37 | nup37 | coding | upstream | 169681 | 23329586 ~ 23340572 (-) |
| G1718421 | LOC106609448 | non-coding | downstream | 909 | 23157132 ~ 23158330 (-) |
| G1718386 | NA | non-coding | downstream | 31742 | 23123414 ~ 23127497 (-) |
| G1718381 | amdhd1 | non-coding | downstream | 55214 | 23102613 ~ 23104025 (-) |
| G1718415 | LOC106576293 | non-coding | downstream | 58437 | 23099015 ~ 23100802 (-) |
| G1718458 | NA | non-coding | upstream | 94719 | 23254624 ~ 23254869 (-) |
| G1718479 | NA | non-coding | upstream | 96981 | 23256886 ~ 23257214 (-) |
| G1718478 | NA | non-coding | upstream | 98827 | 23258732 ~ 23259044 (-) |
| G1718477 | NA | non-coding | upstream | 99477 | 23259382 ~ 23259971 (-) |
| G1718481 | NA | non-coding | upstream | 101768 | 23261673 ~ 23261954 (-) |
| G1718397 | NA | other | downstream | 101420 | 23057381 ~ 23057819 (-) |
| G1718181 | NA | other | downstream | 193362 | 22882496 ~ 22965877 (-) |
| igf1 | LOC100136517 | other | upstream | 206195 | 23366099 ~ 23386794 (-) |
| G1718586 | NA | other | upstream | 322145 | 23482050 ~ 23483029 (-) |
| G1718710 | NA | other | upstream | 413415 | 23573320 ~ 23574041 (-) |
| LOC110500069 | LOC106609440 | other | upstream | 415021 | 23574474 ~ 23586547 (-) |
| G1718713 | NA | other | upstream | 422670 | 23582575 ~ 23582850 (-) |
