Item | Value |
---|---|
gene id | G1717749 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 23198038 ~ 23209398 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1968012 | True | 555 | lncRNA | 0.45 | 2 | 23198038 | 23209398 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110500046 | LOC106609461 | coding | upstream | 8382 | 23164105 ~ 23189656 (+) |
klhl42 | LOC106609448 | coding | upstream | 37365 | 23157083 ~ 23160673 (+) |
amdhd1 | amdhd1 | coding | upstream | 93032 | 23100978 ~ 23105006 (+) |
ruxf | LOC105021811 | coding | upstream | 97215 | 23098972 ~ 23100823 (+) |
LOC110500039 | LOC100194705 | coding | upstream | 157213 | 23033725 ~ 23040825 (+) |
ascl1a | LOC106576285 | coding | downstream | 9546 | 23218944 ~ 23220765 (+) |
LOC110500049 | LOC106576281 | coding | downstream | 86385 | 23295783 ~ 23313876 (+) |
th2 | LOC106609447 | coding | downstream | 104937 | 23314335 ~ 23327014 (+) |
LOC110500052 | NA | coding | downstream | 131790 | 23341188 ~ 23353769 (+) |
LOC110500056 | ccd53 | coding | downstream | 184129 | 23393527 ~ 23397736 (+) |
G1717680 | NA | non-coding | upstream | 13964 | 23179545 ~ 23184074 (+) |
G1717730 | LOC106576289 | non-coding | upstream | 35632 | 23161606 ~ 23162406 (+) |
G1717725 | LOC106609435 | non-coding | upstream | 50269 | 23146757 ~ 23147769 (+) |
G1717720 | NA | non-coding | upstream | 63629 | 23133232 ~ 23134409 (+) |
G1717786 | NA | non-coding | downstream | 47984 | 23257382 ~ 23257585 (+) |
G1717787 | NA | non-coding | downstream | 48439 | 23257837 ~ 23258062 (+) |
G1717789 | NA | non-coding | downstream | 50747 | 23260145 ~ 23261049 (+) |
G1717790 | NA | non-coding | downstream | 51937 | 23261335 ~ 23261638 (+) |
G1717791 | NA | non-coding | downstream | 52272 | 23261670 ~ 23261872 (+) |
LOC110500038 | LOC106609436 | other | upstream | 175274 | 23014617 ~ 23032420 (+) |
G1717520 | NA | other | upstream | 318115 | 22820752 ~ 22879923 (+) |
G1717517 | NA | other | upstream | 346631 | 22849892 ~ 22851407 (+) |
G1717516 | NA | other | upstream | 413593 | 22718919 ~ 22784445 (+) |
G1717785 | NA | other | downstream | 46728 | 23256126 ~ 23256812 (+) |
G1719225 | NA | other | downstream | 864007 | 24073405 ~ 24074448 (+) |
G1719268 | NA | other | downstream | 926366 | 24135764 ~ 24136323 (+) |
adm2a | LOC106609361 | other | downstream | 1068433 | 24277797 ~ 24294858 (+) |
LOC110500097 | LOC106576231 | other | downstream | 1107240 | 24315919 ~ 24321712 (+) |