G1717785


Basic Information

Item Value
gene id G1717785
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23256126 ~ 23256812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1968049
atttttaatgaatttatttgcaaattatcatctttttaagtgggagaacttgcacaattggtggctgactaaatactttttttgccccactgtatagctattgttttgtttttttgtgtgtgatttggattcatcccctctaccacacggaaccccactaatcctaccaACGGAAATGCAcgaggtggctaataacagacctccatcctatgctagcttgctaccgatggcccggctagctgtctaaatctgtgacctcaaccaacctctctactcactggacccttttgatcactcgactaagcatgcctctccttaatgtcatcatgccttgtccattgctgttctggttagtgtttattggcttatttcactgtagagcctctagtcctgctcactataccttatccaacctattagttccaccacccacacatgcgatgacatctcctggtttcaatgatgtttctagagacaatatctctctcttcatcactcaatacctaggtttacctccactgtattcacaccctaccatacctttgtctgtatattataccttgaagctattttatcgcccccagagacctccttttactctctgttccagacgaccaattcttattgcttttagccatacccttatcctactactcctctgttcctctggcgatgtagaggtgaatc
>TU1968048
tgtctaaatctgtgacctcaaccaacctctctactcactggacccttttgatcactcgactaagcatgcctctccttaatgtcatcatgccttgtccattgctgttctggttagtgtttattggcttatttcactgtagagcctctagtcctgctcactataccttatccaacctattagttccaccacccacacatgcgatgacatctcctggtttcaatgatgtttctagagacaatatctctctcttcatcactcaatacctaggtttacctccactgtattcacaccctaccatacctttgtctgtatattataccttgaagctattttatcgcccccagagacctccttttactctctgttccagacgaccaattcttattgcttttagccatacccttatcctactactcctctgttcctctggcgatgtagaggtgaatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1968049 False 687 TUCP 0.43 1 23256126 23256812
TU1968048 True 447 TUCP 0.43 1 23256366 23256812

Neighbor

gene id symbol gene type direction distance location
ascl1a LOC106576285 coding upstream 35361 23218944 ~ 23220765 (+)
LOC110500046 LOC106609461 coding upstream 66470 23164105 ~ 23189656 (+)
klhl42 LOC106609448 coding upstream 95453 23157083 ~ 23160673 (+)
amdhd1 amdhd1 coding upstream 151120 23100978 ~ 23105006 (+)
ruxf LOC105021811 coding upstream 155303 23098972 ~ 23100823 (+)
LOC110500049 LOC106576281 coding downstream 38971 23295783 ~ 23313876 (+)
th2 LOC106609447 coding downstream 57523 23314335 ~ 23327014 (+)
LOC110500052 NA coding downstream 84376 23341188 ~ 23353769 (+)
LOC110500056 ccd53 coding downstream 136715 23393527 ~ 23397736 (+)
LOC110500058 LOC106576272 coding downstream 148650 23405462 ~ 23423738 (+)
G1717749 NA non-coding upstream 46728 23198038 ~ 23209398 (+)
G1717748 NA non-coding upstream 56530 23198728 ~ 23199596 (+)
G1717680 NA non-coding upstream 72052 23179545 ~ 23184074 (+)
G1717730 LOC106576289 non-coding upstream 93720 23161606 ~ 23162406 (+)
G1717786 NA non-coding downstream 570 23257382 ~ 23257585 (+)
G1717787 NA non-coding downstream 1025 23257837 ~ 23258062 (+)
G1717789 NA non-coding downstream 3333 23260145 ~ 23261049 (+)
G1717790 NA non-coding downstream 4523 23261335 ~ 23261638 (+)
G1717791 NA non-coding downstream 4858 23261670 ~ 23261872 (+)
LOC110500038 LOC106609436 other upstream 233362 23014617 ~ 23032420 (+)
G1717520 NA other upstream 376203 22820752 ~ 22879923 (+)
G1717517 NA other upstream 404719 22849892 ~ 22851407 (+)
G1717516 NA other upstream 471681 22718919 ~ 22784445 (+)
G1719225 NA other downstream 816593 24073405 ~ 24074448 (+)
G1719268 NA other downstream 878952 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 1021019 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 1059826 24315919 ~ 24321712 (+)
G1720836 NA other downstream 2355004 25611816 ~ 25612268 (+)

Expression


Co-expression Network