G1717787


Basic Information

Item Value
gene id G1717787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23257837 ~ 23258062 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1968053
ctagaaaccattatacacaggcagttagaaaagccaaggctagctttttcaagcataaatttgcttcctgcaacagtaactcaaaaaagttctgggacactgtaaactcccagctgcccactgcactgaagataggaaacactgtcaccactaataaatccaccataattgagaatttcaataagcatttttctacggctggacatgctttccacctggctactcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1968053 True 226 lncRNA 0.42 1 23257837 23258062

Neighbor

gene id symbol gene type direction distance location
ascl1a LOC106576285 coding upstream 37072 23218944 ~ 23220765 (+)
LOC110500046 LOC106609461 coding upstream 68181 23164105 ~ 23189656 (+)
klhl42 LOC106609448 coding upstream 97164 23157083 ~ 23160673 (+)
amdhd1 amdhd1 coding upstream 152831 23100978 ~ 23105006 (+)
ruxf LOC105021811 coding upstream 157014 23098972 ~ 23100823 (+)
LOC110500049 LOC106576281 coding downstream 37721 23295783 ~ 23313876 (+)
th2 LOC106609447 coding downstream 56273 23314335 ~ 23327014 (+)
LOC110500052 NA coding downstream 83126 23341188 ~ 23353769 (+)
LOC110500056 ccd53 coding downstream 135465 23393527 ~ 23397736 (+)
LOC110500058 LOC106576272 coding downstream 147400 23405462 ~ 23423738 (+)
G1717786 NA non-coding upstream 252 23257382 ~ 23257585 (+)
G1717749 NA non-coding upstream 48439 23198038 ~ 23209398 (+)
G1717748 NA non-coding upstream 58241 23198728 ~ 23199596 (+)
G1717680 NA non-coding upstream 73763 23179545 ~ 23184074 (+)
G1717730 LOC106576289 non-coding upstream 95431 23161606 ~ 23162406 (+)
G1717789 NA non-coding downstream 2083 23260145 ~ 23261049 (+)
G1717790 NA non-coding downstream 3273 23261335 ~ 23261638 (+)
G1717791 NA non-coding downstream 3608 23261670 ~ 23261872 (+)
G1717792 NA non-coding downstream 4233 23262295 ~ 23262494 (+)
G1717794 NA non-coding downstream 8234 23266296 ~ 23266686 (+)
G1717785 NA other upstream 1025 23256126 ~ 23256812 (+)
LOC110500038 LOC106609436 other upstream 235073 23014617 ~ 23032420 (+)
G1717520 NA other upstream 377914 22820752 ~ 22879923 (+)
G1719225 NA other downstream 815343 24073405 ~ 24074448 (+)
G1719268 NA other downstream 877702 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 1019769 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 1058576 24315919 ~ 24321712 (+)
G1720836 NA other downstream 2353754 25611816 ~ 25612268 (+)

Expression


Co-expression Network