G1717792


Basic Information

Item Value
gene id G1717792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 23262295 ~ 23262494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1968058
caactgctcgggacaaaggggcgatagcagctcgggacagaggggcgatagcagctcgggacagaggggcgatagcagctcgggacagaggggcgatggctgctctggacagaggggcagctgctcgggcggcccctggctgactgacggcactggcggcccctggcttactggcggcactggcggcccctggctgactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1968058 True 200 lncRNA 0.70 1 23262295 23262494

Neighbor

gene id symbol gene type direction distance location
ascl1a LOC106576285 coding upstream 41530 23218944 ~ 23220765 (+)
LOC110500046 LOC106609461 coding upstream 72639 23164105 ~ 23189656 (+)
klhl42 LOC106609448 coding upstream 101622 23157083 ~ 23160673 (+)
amdhd1 amdhd1 coding upstream 157289 23100978 ~ 23105006 (+)
ruxf LOC105021811 coding upstream 161472 23098972 ~ 23100823 (+)
LOC110500049 LOC106576281 coding downstream 33289 23295783 ~ 23313876 (+)
th2 LOC106609447 coding downstream 51841 23314335 ~ 23327014 (+)
LOC110500052 NA coding downstream 78694 23341188 ~ 23353769 (+)
LOC110500056 ccd53 coding downstream 131033 23393527 ~ 23397736 (+)
LOC110500058 LOC106576272 coding downstream 142968 23405462 ~ 23423738 (+)
G1717791 NA non-coding upstream 423 23261670 ~ 23261872 (+)
G1717790 NA non-coding upstream 657 23261335 ~ 23261638 (+)
G1717789 NA non-coding upstream 1246 23260145 ~ 23261049 (+)
G1717787 NA non-coding upstream 4233 23257837 ~ 23258062 (+)
G1717786 NA non-coding upstream 4710 23257382 ~ 23257585 (+)
G1717794 NA non-coding downstream 3802 23266296 ~ 23266686 (+)
G1717800 NA non-coding downstream 12237 23274731 ~ 23275055 (+)
G1717822 NA non-coding downstream 67095 23329589 ~ 23330057 (+)
G1717875 NA non-coding downstream 181197 23443691 ~ 23444109 (+)
G1717785 NA other upstream 5483 23256126 ~ 23256812 (+)
LOC110500038 LOC106609436 other upstream 239531 23014617 ~ 23032420 (+)
G1717520 NA other upstream 382372 22820752 ~ 22879923 (+)
G1719225 NA other downstream 810911 24073405 ~ 24074448 (+)
G1719268 NA other downstream 873270 24135764 ~ 24136323 (+)
adm2a LOC106609361 other downstream 1015337 24277797 ~ 24294858 (+)
LOC110500097 LOC106576231 other downstream 1054144 24315919 ~ 24321712 (+)
G1720836 NA other downstream 2349322 25611816 ~ 25612268 (+)

Expression


Co-expression Network